Information for 12-CCHGGCCTKGYMR (Motif 27)

G T A C G T A C G A C T C T A G A C T G T G A C G T A C G A C T C A T G A C T G A G T C T G A C T C G A
Reverse Opposite:
A G C T A C T G T C A G T G A C G T A C C T G A C A T G A C T G T G A C G A T C C T G A A C T G C A T G
p-value:1e-9
log p-value:-2.175e+01
Information Content per bp:1.578
Number of Target Sequences with motif97.0
Percentage of Target Sequences with motif13.92%
Number of Background Sequences with motif3185.4
Percentage of Background Sequences with motif7.14%
Average Position of motif in Targets47.1 +/- 25.9bp
Average Position of motif in Background50.9 +/- 32.2bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:CCHGGCCTKGYMR
CNAGGCCT-----
 G T A C G T A C G A C T C T A G A C T G T G A C G T A C G A C T C A T G A C T G A G T C T G A C T C G A
A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T A C G T A C G T A C G T A C G T A C G T

Zfx/MA0146.2/Jaspar

Match Rank:2
Score:0.67
Offset:-5
Orientation:forward strand
Alignment:-----CCHGGCCTKGYMR
GGGGCCGAGGCCTG----
 A C G T A C G T A C G T A C G T A C G T G T A C G T A C G A C T C T A G A C T G T G A C G T A C G A C T C A T G A C T G A G T C T G A C T C G A
A T C G A T C G T A C G C T A G A T G C G A T C A C T G T G C A T C A G A T C G A G T C A G T C A G C T T A C G A C G T A C G T A C G T A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:3
Score:0.67
Offset:2
Orientation:forward strand
Alignment:CCHGGCCTKGYMR
--AGGCCTAG---
 G T A C G T A C G A C T C T A G A C T G T G A C G T A C G A C T C A T G A C T G A G T C T G A C T C G A
A C G T A C G T T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G A C G T A C G T A C G T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:4
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:CCHGGCCTKGYMR
BNTGDCCTTG---
 G T A C G T A C G A C T C T A G A C T G T G A C G T A C G A C T C A T G A C T G A G T C T G A C T C G A
A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G A C G T A C G T A C G T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:5
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--CCHGGCCTKGYMR
NNACTTGCCTT----
 A C G T A C G T G T A C G T A C G A C T C T A G A C T G T G A C G T A C G A C T C A T G A C T G A G T C T G A C T C G A
T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T A C G T A C G T A C G T A C G T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:6
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:CCHGGCCTKGYMR
--TGACCTTGAN-
 G T A C G T A C G A C T C T A G A C T G T G A C G T A C G A C T C A T G A C T G A G T C T G A C T C G A
A C G T A C G T G C A T C T A G C T G A T G A C G A T C A G C T C A G T A T C G C T G A T G C A A C G T

Nr5a2/MA0505.1/Jaspar

Match Rank:7
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CCHGGCCTKGYMR--
GCTGACCTTGAACTN
 G T A C G T A C G A C T C T A G A C T G T G A C G T A C G A C T C A T G A C T G A G T C T G A C T C G A A C G T A C G T
T A C G T G A C G C A T T C A G C T G A A G T C A G T C A G C T C A G T A T C G C T G A T C G A G A T C G A C T A G C T

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:8
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CCHGGCCTKGYMR-
TCCCAGMCRAGCCCC
 A C G T G T A C G T A C G A C T C T A G A C T G T G A C G T A C G A C T C A T G A C T G A G T C T G A C T C G A A C G T
A G C T A G T C A G T C A G T C C T G A T C A G T G C A G A T C T C G A C G T A A C T G A T G C G T A C G T A C G A T C

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:9
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:CCHGGCCTKGYMR
--TGACCTTGAV-
 G T A C G T A C G A C T C T A G A C T G T G A C G T A C G A C T C A T G A C T G A G T C T G A C T C G A
A C G T A C G T G C A T C T A G C T G A G A T C G T A C G A C T G A C T A T C G C T G A T G C A A C G T

PB0180.1_Sp4_2/Jaspar

Match Rank:10
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----CCHGGCCTKGYMR
NNGGCCACGCCTTTN--
 A C G T A C G T A C G T A C G T G T A C G T A C G A C T C T A G A C T G T G A C G T A C G A C T C A T G A C T G A G T C T G A C T C G A
G T A C C A G T C T A G C T A G T G A C G A T C T G C A T G A C A C T G T G A C T A G C A G C T G C A T G C A T T C A G A C G T A C G T