Information for 6-GCACTGCGCG (Motif 25)

A T C G A T G C T G C A A G T C A C G T A C T G T G A C A T C G A T G C C T A G
Reverse Opposite:
A G T C A T C G A T G C A C T G A G T C C G T A A C T G A C G T A T C G A T G C
p-value:1e-9
log p-value:-2.199e+01
Information Content per bp:1.853
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.87%
Number of Background Sequences with motif73.1
Percentage of Background Sequences with motif0.16%
Average Position of motif in Targets46.6 +/- 31.1bp
Average Position of motif in Background45.7 +/- 23.8bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0199.1_Zfp161_2/Jaspar

Match Rank:1
Score:0.89
Offset:-2
Orientation:reverse strand
Alignment:--GCACTGCGCG--
NNGCNCTGCGCGGC
 A C G T A C G T A T C G A T G C T G C A A G T C A C G T A C T G T G A C A T C G A T G C C T A G A C G T A C G T
T C G A A G T C C A T G G A T C T G C A G A T C C A G T A C T G A G T C C T A G A T G C C T A G C T A G G T A C

PB0091.1_Zbtb3_1/Jaspar

Match Rank:2
Score:0.70
Offset:-4
Orientation:forward strand
Alignment:----GCACTGCGCG---
AATCGCACTGCATTCCG
 A C G T A C G T A C G T A C G T A T C G A T G C T G C A A G T C A C G T A C T G T G A C A T C G A T G C C T A G A C G T A C G T A C G T
C T G A C T G A A C G T A T G C A T C G G T A C C T G A A T G C C G A T A C T G A T G C G T C A A G C T A C G T A T G C A T G C A C T G

PB0099.1_Zfp691_1/Jaspar

Match Rank:3
Score:0.66
Offset:-7
Orientation:reverse strand
Alignment:-------GCACTGCGCG
NNNNTGAGCACTGTNNG
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G A T G C T G C A A G T C A C G T A C T G T G A C A T C G A T G C C T A G
G C T A G A C T C G T A T C A G A C G T A C T G C T G A A C T G A G T C C G T A G T A C A G C T C A T G A G C T C A G T G T A C T C A G

PB0207.1_Zic3_2/Jaspar

Match Rank:4
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GCACTGCGCG---
GAGCACAGCAGGACA
 A C G T A C G T A T C G A T G C T G C A A G T C A C G T A C T G T G A C A T C G A T G C C T A G A C G T A C G T A C G T
C A T G C G T A C T A G T G A C C T G A A G T C C G T A C T A G A G T C C T G A A C T G A C T G G T C A T A G C C G T A

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:5
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GCACTGCGCG
DCTCAGCAGG
 A T C G A T G C T G C A A G T C A C G T A C T G T G A C A T C G A T G C C T A G
C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:6
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GCACTGCGCG-----
DCHCAGCAGGRGGCC
 A T C G A T G C T G C A A G T C A C G T A C T G T G A C A T C G A T G C C T A G A C G T A C G T A C G T A C G T A C G T
C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

POL009.1_DCE_S_II/Jaspar

Match Rank:7
Score:0.57
Offset:2
Orientation:forward strand
Alignment:GCACTGCGCG
--GCTGTG--
 A T C G A T G C T G C A A G T C A C G T A C T G T G A C A T C G A T G C C T A G
A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:8
Score:0.55
Offset:4
Orientation:forward strand
Alignment:GCACTGCGCG
----TGCGTG
 A T C G A T G C T G C A A G T C A C G T A C T G T G A C A T C G A T G C C T A G
A C G T A C G T A C G T A C G T G A C T A C T G A G T C A C T G A C G T A C T G

ZIC3/MA0697.1/Jaspar

Match Rank:9
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:GCACTGCGCG-----
NCGCAGCGGGGGGTC
 A T C G A T G C T G C A A G T C A C G T A C T G T G A C A T C G A T G C C T A G A C G T A C G T A C G T A C G T A C G T
C A T G G T A C C T A G G A T C T G C A T C A G A G T C C T A G A C T G A C T G C A T G C A T G C A T G A G C T T G A C

ZIC4/MA0751.1/Jaspar

Match Rank:10
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:GCACTGCGCG-----
NCNCAGCGGGGGGTC
 A T C G A T G C T G C A A G T C A C G T A C T G T G A C A T C G A T G C C T A G A C G T A C G T A C G T A C G T A C G T
C A T G T G A C C T G A G A T C G T C A T C A G G A T C C T A G C A T G C A T G C A T G C A T G C A T G A G C T T G A C