Information for 4-WSAWKMMKGCMTGCWY (Motif 10)

C G T A T A C G C G T A C G A T A C T G G T A C G T C A A C G T A C T G A T G C G T A C C G A T A C T G G T A C C G T A A G C T
Reverse Opposite:
C T G A C G A T A C T G G T A C C G T A A C T G A T C G A G T C G T C A A C G T A C T G G T A C C G T A A C G T A T G C G C A T
p-value:1e-11
log p-value:-2.561e+01
Information Content per bp:1.748
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.72%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets38.3 +/- 11.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:1
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-WSAWKMMKGCMTGCWY
GTCATGCHTGRCTGS--
 A C G T C G T A T A C G C G T A C G A T A C T G G T A C G T C A A C G T A C T G A T G C G T A C C G A T A C T G G T A C C G T A A G C T
A C T G A G C T A G T C G T C A A G C T T C A G A T G C G A T C G C A T A T C G T C G A T A G C C G A T C A T G T A G C A C G T A C G T

PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--WSAWKMMKGCMTGCWY
NGTCACGCTTGGCTGC--
 A C G T A C G T C G T A T A C G C G T A C G A T A C T G G T A C G T C A A C G T A C T G A T G C G T A C C G A T A C T G G T A C C G T A A G C T
C T A G A C T G A G C T A G T C G T C A G A T C T C A G A T G C G C A T G A C T A T C G T C A G T A G C G A C T C T A G T G A C A C G T A C G T

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:3
Score:0.53
Offset:7
Orientation:forward strand
Alignment:WSAWKMMKGCMTGCWY
-------TGCGTG---
 C G T A T A C G C G T A C G A T A C T G G T A C G T C A A C G T A C T G A T G C G T A C C G A T A C T G G T A C C G T A A G C T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T A C T G A G T C A C T G A C G T A C T G A C G T A C G T A C G T

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:4
Score:0.53
Offset:6
Orientation:reverse strand
Alignment:WSAWKMMKGCMTGCWY
------TTGCGTGCVA
 C G T A T A C G C G T A C G A T A C T G G T A C G T C A A C G T A C T G A T G C G T A C C G A T A C T G G T A C C G T A A G C T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A G T A C T G A G T C T C A G C G A T C A T G G T A C T A G C C G T A

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.53
Offset:6
Orientation:forward strand
Alignment:WSAWKMMKGCMTGCWY
------AGGCCTNG--
 C G T A T A C G C G T A C G A T A C T G G T A C G T C A A C G T A C T G A T G C G T A C C G A T A C T G G T A C C G T A A G C T
A C G T A C G T A C G T A C G T A C G T A C G T C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G A C G T A C G T

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:6
Score:0.52
Offset:7
Orientation:reverse strand
Alignment:WSAWKMMKGCMTGCWY------
-------TGCCTGCGYCMCCTT
 C G T A T A C G C G T A C G A T A C T G G T A C G T C A A C G T A C T G A T G C G T A C C G A T A C T G G T A C C G T A A G C T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A G T A C T G A G T C A G T C A C G T A C T G A T G C C T A G A G T C G A T C G T C A A G T C A G T C G C A T A C G T

Pit1+1bp(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:7
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:WSAWKMMKGCMTGCWY
TGAATTATGCAT----
 C G T A T A C G C G T A C G A T A C T G G T A C G T C A A C G T A C T G A T G C G T A C C G A T A C T G G T A C C G T A A G C T
C G A T C T A G G T C A G C T A C G A T G C A T G C T A C G A T C A T G G A T C G C T A C G A T A C G T A C G T A C G T A C G T

PAX9/MA0781.1/Jaspar

Match Rank:8
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--WSAWKMMKGCMTGCWY
CGTCACGCATGACTGCA-
 A C G T A C G T C G T A T A C G C G T A C G A T A C T G G T A C G T C A A C G T A C T G A T G C G T A C C G A T A C T G G T A C C G T A A G C T
A T G C A C T G G C A T A G T C T G C A A G T C A C T G A T G C G C T A G A C T A T C G C T G A T A G C G A C T C A T G T G A C G T C A A C G T

Pax6/MA0069.1/Jaspar

Match Rank:9
Score:0.50
Offset:1
Orientation:reverse strand
Alignment:WSAWKMMKGCMTGCWY
-AANTCATGCGTGAA-
 C G T A T A C G C G T A C G A T A C T G G T A C G T C A A C G T A C T G A T G C G T A C C G A T A C T G G T A C C G T A A G C T
A C G T G T C A T C G A A G T C G A C T A T G C C T G A C G A T A T C G G A T C C T A G A C G T C T A G C G T A T C G A A C G T

OCT:OCT(POU,Homeobox,IR1)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:10
Score:0.50
Offset:-1
Orientation:forward strand
Alignment:-WSAWKMMKGCMTGCWY
ATGAATWATTCATGA--
 A C G T C G T A T A C G C G T A C G A T A C T G G T A C G T C A A C G T A C T G A T G C G T A C C G A T A C T G G T A C C G T A A G C T
G T C A A C G T C T A G G T C A C G T A G C A T C G T A C G T A G C A T C A G T A G T C C G T A C A G T C T A G C T G A A C G T A C G T