Information for 4-CTCCTAGCAGCCA (Motif 9)

G T A C A G C T A G T C A G T C A C G T T G C A A T C G A G T C C T G A A T C G A T G C A G T C C G T A
Reverse Opposite:
A C G T A C T G A T C G A T G C A G C T A C T G A T G C A C G T C G T A A C T G A C T G C T G A A C T G
p-value:1e-12
log p-value:-2.784e+01
Information Content per bp:1.855
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.01%
Number of Background Sequences with motif7.1
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets42.1 +/- 22.1bp
Average Position of motif in Background55.4 +/- 16.5bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer

Match Rank:1
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---CTCCTAGCAGCCA
TGTTKCCTAGCAACM-
 A C G T A C G T A C G T G T A C A G C T A G T C A G T C A C G T T G C A A T C G A G T C C T G A A T C G A T G C A G T C C G T A
C A G T T C A G A G C T G A C T A C G T A G T C G A T C G A C T C T G A A C T G G A T C C G T A C T G A A G T C G T A C A C G T

PB0054.1_Rfx3_1/Jaspar

Match Rank:2
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----CTCCTAGCAGCCA-----
TGTGACCCTTAGCAACCGATTAA
 A C G T A C G T A C G T A C G T A C G T G T A C A G C T A G T C A G T C A C G T T G C A A T C G A G T C C T G A A T C G A T G C A G T C C G T A A C G T A C G T A C G T A C G T A C G T
G A C T C A T G A G C T A T C G G T C A G A T C T G A C A T G C G A C T A G C T T C G A C T A G G A T C C T G A C G T A A G T C T A G C T C A G C G T A G C A T G C A T G C T A G C T A

PB0055.1_Rfx4_1/Jaspar

Match Rank:3
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CTCCTAGCAGCCA-
TACCATAGCAACGGT
 A C G T G T A C A G C T A G T C A G T C A C G T T G C A A T C G A G T C C T G A A T C G A T G C A G T C C G T A A C G T
A G C T G T C A T A G C A T G C G T C A A G C T T C G A C T A G G A T C C T G A C T G A A G T C T A C G T C A G C G A T

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:4
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CTCCTAGCAGCCA-
CCGCATAGCAACGGA
 A C G T G T A C A G C T A G T C A G T C A C G T T G C A A T C G A G T C C T G A A T C G A T G C A G T C C G T A A C G T
A G T C A G T C T A C G A T G C G C T A G A C T T C G A C T A G G A T C C T G A T C G A A G T C T A C G T C A G C T G A

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:5
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CTCCTAGCAGCCA
ATTTCCCAGVAKSCY
 A C G T A C G T G T A C A G C T A G T C A G T C A C G T T G C A A T C G A G T C C T G A A T C G A T G C A G T C C G T A
T G C A G C A T A G C T G C A T A G T C A G T C A G T C C T G A A C T G T C G A T C G A C A G T A T C G A G T C G A T C

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CTCCTAGCAGCCA
-SCCTAGCAACAG
 G T A C A G C T A G T C A G T C A C G T T G C A A T C G A G T C C T G A A T C G A T G C A G T C C G T A
A C G T A T G C A G T C G T A C A G C T T C G A C T A G G A T C C T G A G T C A A G T C G C T A T C A G

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:7
Score:0.55
Offset:6
Orientation:reverse strand
Alignment:CTCCTAGCAGCCA-
------BCAGACWA
 G T A C A G C T A G T C A G T C A C G T T G C A A T C G A G T C C T G A A T C G A T G C A G T C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A

PB0181.1_Spdef_2/Jaspar

Match Rank:8
Score:0.55
Offset:-6
Orientation:forward strand
Alignment:------CTCCTAGCAGCCA
GATAACATCCTAGTAG---
 A C G T A C G T A C G T A C G T A C G T A C G T G T A C A G C T A G T C A G T C A C G T T G C A A T C G A G T C C T G A A T C G A T G C A G T C C G T A
C T A G C G T A A C G T G C T A C T G A A G T C C G T A C G A T G A T C A G T C A G C T G C T A A C T G G C A T C G T A T C A G A C G T A C G T A C G T

INSM1/MA0155.1/Jaspar

Match Rank:9
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---CTCCTAGCAGCCA
CGCCCCCTGACA----
 A C G T A C G T A C G T G T A C A G C T A G T C A G T C A C G T T G C A A T C G A G T C C T G A A T C G A T G C A G T C C G T A
G A T C C T A G T G A C A G T C A G T C A T G C A G T C C G A T C A T G T C G A G T A C G T C A A C G T A C G T A C G T A C G T

BCL6B/MA0731.1/Jaspar

Match Rank:10
Score:0.53
Offset:-4
Orientation:reverse strand
Alignment:----CTCCTAGCAGCCA
TGAATTCCTAGAAAGCA
 A C G T A C G T A C G T A C G T G T A C A G C T A G T C A G T C A C G T T G C A A T C G A G T C C T G A A T C G A T G C A G T C C G T A
A C G T A C T G C T G A C T G A A C G T A G C T A G T C A G T C A C G T T G C A A C T G G T C A C G T A C G T A C T A G G A T C C T G A