Information for 19-CAAAGGAAAG (Motif 29)

A G T C C G T A C G T A C G T A A C T G A C T G C G T A C G T A C G T A A C T G
Reverse Opposite:
A G T C A C G T A C G T A C G T A G T C A G T C A C G T A C G T A C G T A C T G
p-value:1e-4
log p-value:-1.007e+01
Information Content per bp:1.530
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.63%
Number of Background Sequences with motif22.2
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets42.2 +/- 20.0bp
Average Position of motif in Background64.7 +/- 23.9bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer

Match Rank:1
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-CAAAGGAAAG-
AGAAACGAAAGT
 A C G T A G T C C G T A C G T A C G T A A C T G A C T G C G T A C G T A C G T A A C T G A C G T
T C G A C T A G C T G A C G T A C G T A A G T C T A C G C G T A C G T A C G T A A T C G A C G T

NFATC3/MA0625.1/Jaspar

Match Rank:2
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:CAAAGGAAAG-
-AATGGAAAAT
 A G T C C G T A C G T A C G T A A C T G A C T G C G T A C G T A C G T A A C T G A C G T
A C G T C G T A C T G A G A C T T A C G C A T G T C G A C G T A G C T A C T G A G C A T

PB0083.1_Tcf7_1/Jaspar

Match Rank:3
Score:0.67
Offset:-7
Orientation:forward strand
Alignment:-------CAAAGGAAAG
TATAGATCAAAGGAAAA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A C G T A C G T A A C T G A C T G C G T A C G T A C G T A A C T G
A C G T G C T A G C A T C G T A A T C G C G T A G C A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G T C A G C A T G C T A

Sox2/MA0143.3/Jaspar

Match Rank:4
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--CAAAGGAAAG
AACAAAGG----
 A C G T A C G T A G T C C G T A C G T A C G T A A C T G A C T G C G T A C G T A C G T A A C T G
T C G A C G T A A G T C C G T A C G T A C G T A A C T G A C T G A C G T A C G T A C G T A C G T

NFATC1/MA0624.1/Jaspar

Match Rank:5
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:CAAAGGAAAG-
-NNTGGAAANN
 A G T C C G T A C G T A C G T A A C T G A C T G C G T A C G T A C G T A A C T G A C G T
A C G T C G T A C T G A G A C T C T A G A C T G C T G A C T G A G C T A C G T A G C A T

PB0166.1_Sox12_2/Jaspar

Match Rank:6
Score:0.67
Offset:-7
Orientation:forward strand
Alignment:-------CAAAGGAAAG
AAACAGACAAAGGAAT-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A C G T A C G T A A C T G A C T G C G T A C G T A C G T A A C T G
T G C A T G C A C G T A A G C T C T G A A T C G C G T A A G T C G C T A T C G A G C T A T A C G T C A G T G C A C G T A G A C T A C G T

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:7
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:CAAAGGAAAG
NACAGGAAAT
 A G T C C G T A C G T A C G T A A C T G A C T G C G T A C G T A C G T A A C T G
T A G C C T G A T A G C G T C A A C T G A C T G C G T A C G T A C T G A A G C T

SPIB/MA0081.1/Jaspar

Match Rank:8
Score:0.66
Offset:1
Orientation:forward strand
Alignment:CAAAGGAAAG
-AGAGGAA--
 A G T C C G T A C G T A C G T A A C T G A C T G C G T A C G T A C G T A A C T G
A C G T C G T A T A C G T G C A C T A G C A T G C G T A C G T A A C G T A C G T

PB0082.1_Tcf3_1/Jaspar

Match Rank:9
Score:0.66
Offset:-7
Orientation:forward strand
Alignment:-------CAAAGGAAAG
TATAGATCAAAGGAAAA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A C G T A C G T A A C T G A C T G C G T A C G T A C G T A A C T G
G A C T G C T A G C A T C G T A A T C G C G T A G C A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G C T A G C T A G C T A

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.65
Offset:0
Orientation:forward strand
Alignment:CAAAGGAAAG
CAAAGGTCAG
 A G T C C G T A C G T A C G T A A C T G A C T G C G T A C G T A C G T A A C T G
A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G