Information for 12-ATAGTTTATG (Motif 22)

C G T A C A G T T C G A A C T G C A G T A G C T C A G T T C G A C G A T T A C G
Reverse Opposite:
A T G C G C T A A G C T G T C A T C G A G T C A T G A C A G C T G T C A G C A T
p-value:1e-8
log p-value:-1.922e+01
Information Content per bp:1.667
Number of Target Sequences with motif44.0
Percentage of Target Sequences with motif5.56%
Number of Background Sequences with motif955.2
Percentage of Background Sequences with motif2.04%
Average Position of motif in Targets52.7 +/- 28.8bp
Average Position of motif in Background51.5 +/- 31.2bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Foxq1/MA0040.1/Jaspar

Match Rank:1
Score:0.74
Offset:-1
Orientation:forward strand
Alignment:-ATAGTTTATG
TATTGTTTATT
 A C G T C G T A C A G T T C G A A C T G C A G T A G C T C A G T T C G A C G A T T A C G
G A C T C T G A G C A T C G A T A C T G A C G T A C G T A C G T C T G A A C G T C G A T

CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer

Match Rank:2
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:ATAGTTTATG---
-DGWTTTATGRCN
 C G T A C A G T T C G A A C T G C A G T A G C T C A G T T C G A C G A T T A C G A C G T A C G T A C G T
A C G T C A G T C A T G G C A T C G A T C G A T C G A T C T G A A G C T C A T G C T A G A G T C A T G C

Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer

Match Rank:3
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:ATAGTTTATG--
--NTTTTATGAC
 C G T A C A G T T C G A A C T G C A G T A G C T C A G T T C G A C G A T T A C G A C G T A C G T
A C G T A C G T C T G A C G A T A C G T A C G T A C G T C G T A A C G T C A T G C T G A A G T C

POU4F1/MA0790.1/Jaspar

Match Rank:4
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----ATAGTTTATG
ATGAATAATTAATG
 A C G T A C G T A C G T A C G T C G T A C A G T T C G A A C T G C A G T A G C T C A G T T C G A C G A T T A C G
T C G A G A C T C T A G G T C A G C T A C G A T C G T A C G T A C G A T C G A T C G T A T C G A G A C T C A T G

CDX1/MA0878.1/Jaspar

Match Rank:5
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:ATAGTTTATG--
---TTTTATTGC
 C G T A C A G T T C G A A C T G C A G T A G C T C A G T T C G A C G A T T A C G A C G T A C G T
A C G T A C G T A C G T C A G T C G A T G C A T C G A T C G T A A G C T C A G T C T A G A G T C

CDX2/MA0465.1/Jaspar

Match Rank:6
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:ATAGTTTATG----
---TTTTATGGCTN
 C G T A C A G T T C G A A C T G C A G T A G C T C A G T T C G A C G A T T A C G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A G C T A C G T A C G T A C G T C G T A A C G T C A T G C T A G A G T C G A C T A G C T

POU4F3/MA0791.1/Jaspar

Match Rank:7
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----ATAGTTTATG--
ATGCATAATTAATGAG
 A C G T A C G T A C G T A C G T C G T A C A G T T C G A A C T G C A G T A G C T C A G T T C G A C G A T T A C G A C G T A C G T
C T G A A G C T C A T G G T A C G C T A C G A T C G T A C G T A C G A T C G A T C G T A C T G A G A C T C A T G G T C A T C A G

BARHL2/MA0635.1/Jaspar

Match Rank:8
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:ATAGTTTATG
ANCGTTTANN
 C G T A C A G T T C G A A C T G C A G T A G C T C A G T T C G A C G A T T A C G
C T G A A G T C G A T C C T A G G C A T A C G T C G A T C G T A C T A G A T G C

PH0073.1_Hoxc9/Jaspar

Match Rank:9
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:ATAGTTTATG------
NNAATTAATGACCNNN
 C G T A C A G T T C G A A C T G C A G T A G C T C A G T T C G A C G A T T A C G A C G T A C G T A C G T A C G T A C G T A C G T
T G C A G C A T C T G A C T G A C G A T A C G T C G T A C G T A A G C T A C T G C T G A A G T C G A T C A G C T G T A C A G T C

PH0013.1_Cdx2/Jaspar

Match Rank:10
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:ATAGTTTATG------
NAATTTTATTACCNNN
 C G T A C A G T T C G A A C T G C A G T A G C T C A G T T C G A C G A T T A C G A C G T A C G T A C G T A C G T A C G T A C G T
C T G A G T C A C T G A C G A T C G A T C G A T C G A T C G T A A G C T C A G T C T G A A G T C G A T C A C G T A G C T G C A T