Information for 10-CTCCCTTAGG (Motif 22)

A G T C A C G T G A T C A G T C A G T C A C G T G C A T C G T A A C T G T C A G
Reverse Opposite:
A G T C A G T C C G A T C G T A C G T A C T A G A C T G C T A G C G T A A C T G
p-value:1e-7
log p-value:-1.705e+01
Information Content per bp:1.855
Number of Target Sequences with motif21.0
Percentage of Target Sequences with motif2.35%
Number of Background Sequences with motif258.6
Percentage of Background Sequences with motif0.54%
Average Position of motif in Targets53.7 +/- 23.5bp
Average Position of motif in Background46.1 +/- 27.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer

Match Rank:1
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:CTCCCTTAGG
-BCMATTAG-
 A G T C A C G T G A T C A G T C A G T C A C G T G C A T C G T A A C T G T C A G
A C G T A C T G A G T C G T C A G T C A A C G T A G C T C G T A T C A G A C G T

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:2
Score:0.62
Offset:2
Orientation:forward strand
Alignment:CTCCCTTAGG----
--SCCTSAGGSCAW
 A G T C A C G T G A T C A G T C A G T C A C G T G C A T C G T A A C T G T C A G A C G T A C G T A C G T A C G T
A C G T A C G T A T C G A G T C A G T C G A C T A T G C C T G A C T A G A C T G T A C G G T A C C T G A C G A T

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----CTCCCTTAGG
CNGTCCTCCC-----
 A C G T A C G T A C G T A C G T A C G T A G T C A C G T G A T C A G T C A G T C A C G T G C A T C G T A A C T G T C A G
A T G C T C G A T A C G A C G T A T G C A G T C A C G T A G T C A G T C G A T C A C G T A C G T A C G T A C G T A C G T

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:CTCCCTTAGG----
--GCCTCAGGGCAT
 A G T C A C G T G A T C A G T C A G T C A C G T G C A T C G T A A C T G T C A G A C G T A C G T A C G T A C G T
A C G T A C G T A T C G A G T C A G T C A G C T A T G C C T G A C T A G A C T G A T C G G T A C G C T A C G A T

PB0087.1_Tcfap2c_1/Jaspar

Match Rank:5
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CTCCCTTAGG----
ATTGCCTGAGGCGAA
 A C G T A G T C A C G T G A T C A G T C A G T C A C G T G C A T C G T A A C T G T C A G A C G T A C G T A C G T A C G T
C G T A G C A T G A C T A T C G G T A C A G T C A G C T A T C G T C G A C T A G A C T G T A G C C T A G G C T A C G T A

PB0085.1_Tcfap2a_1/Jaspar

Match Rank:6
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CTCCCTTAGG----
ATTCCCTGAGGGGAA
 A C G T A G T C A C G T G A T C A G T C A G T C A C G T G C A T C G T A A C T G T C A G A C G T A C G T A C G T A C G T
C G T A C G A T G A C T A T G C G T A C A G T C A G C T A T C G T C G A C T A G A C T G T A C G C T A G C G T A C T G A

EBF1/MA0154.3/Jaspar

Match Rank:7
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CTCCCTTAGG---
ANTCCCTNGGGAAT
 A C G T A G T C A C G T G A T C A G T C A G T C A C G T G C A T C G T A A C T G T C A G A C G T A C G T A C G T
C T G A C A G T G A C T G T A C A G T C A G T C G C A T C G A T C T A G T C A G T A C G C T G A T G C A G A C T

POL013.1_MED-1/Jaspar

Match Rank:8
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CTCCCTTAGG
GCTCCG-----
 A C G T A G T C A C G T G A T C A G T C A G T C A C G T G C A T C G T A A C T G T C A G
A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T A C G T A C G T A C G T

EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer

Match Rank:9
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CTCCCTTAGG-
NGTCCCNNGGGA
 A C G T A G T C A C G T G A T C A G T C A G T C A C G T G C A T C G T A A C T G T C A G A C G T
C T A G A T C G G A C T A G T C A G T C A G T C G A C T C T G A A C T G C T A G A C T G C T G A

HLTF/MA0109.1/Jaspar

Match Rank:10
Score:0.57
Offset:1
Orientation:forward strand
Alignment:CTCCCTTAGG-
-AACCTTATAT
 A G T C A C G T G A T C A G T C A G T C A C G T G C A T C G T A A C T G T C A G A C G T
A C G T C G T A G C T A G T A C A G T C C G A T A C G T C G T A A C G T T C G A G A C T