Information for 5-AGATGAGTAAACAART (Motif 9)

C T G A T A C G G T C A A C G T C T A G C G T A C T A G A C G T C G T A T C G A C T G A T G A C C G T A C T G A C T A G C G A T
Reverse Opposite:
G C T A G A T C G A C T C G A T A C T G A G C T A C G T A C G T T G C A A G T C C G A T A G T C G T C A A C G T A G T C A G C T
p-value:1e-13
log p-value:-3.199e+01
Information Content per bp:1.669
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.88%
Number of Background Sequences with motif41.8
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets37.6 +/- 18.5bp
Average Position of motif in Background46.9 +/- 26.1bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer

Match Rank:1
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:AGATGAGTAAACAART
---TATGTAAACANG-
 C T G A T A C G G T C A A C G T C T A G C G T A C T A G A C G T C G T A T C G A C T G A T G A C C G T A C T G A C T A G C G A T
A C G T A C G T A C G T G C A T T C G A C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A C T G A T A C G A C G T

FOXP2/MA0593.1/Jaspar

Match Rank:2
Score:0.66
Offset:4
Orientation:forward strand
Alignment:AGATGAGTAAACAART
----AAGTAAACAAA-
 C T G A T A C G G T C A A C G T C T A G C G T A C T A G A C G T C G T A T C G A C T G A T G A C C G T A C T G A C T A G C G A T
A C G T A C G T A C G T A C G T C T G A C G T A C T A G C G A T C G T A C G T A C G T A A G T C C G T A T C G A C T G A A C G T

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:3
Score:0.66
Offset:3
Orientation:forward strand
Alignment:AGATGAGTAAACAART
---AAAGTAAACA---
 C T G A T A C G G T C A A C G T C T A G C G T A C T A G A C G T C G T A T C G A C T G A T G A C C G T A C T G A C T A G C G A T
A C G T A C G T A C G T G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A A C G T A C G T A C G T

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:4
Score:0.66
Offset:3
Orientation:forward strand
Alignment:AGATGAGTAAACAART
---AAAGTAAACA---
 C T G A T A C G G T C A A C G T C T A G C G T A C T A G A C G T C G T A T C G A C T G A T G A C C G T A C T G A C T A G C G A T
A C G T A C G T A C G T G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A A C G T A C G T A C G T

FOXA1/MA0148.3/Jaspar

Match Rank:5
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:AGATGAGTAAACAART-
--CAAAGTAAACANNNN
 C T G A T A C G G T C A A C G T C T A G C G T A C T A G A C G T C G T A T C G A C T G A T G A C C G T A C T G A C T A G C G A T A C G T
A C G T A C G T G T A C G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C G C T A C G A T T A C G T C A G C T G A

FOXO3/MA0157.2/Jaspar

Match Rank:6
Score:0.64
Offset:6
Orientation:forward strand
Alignment:AGATGAGTAAACAART
------GTAAACAA--
 C T G A T A C G G T C A A C G T C T A G C G T A C T A G A C G T C G T A T C G A C T G A T G A C C G T A C T G A C T A G C G A T
A C G T A C G T A C G T A C G T A C G T A C G T C T A G A C G T T G C A G T C A G T C A G T A C G T C A C G T A A C G T A C G T

FOXC2/MA0846.1/Jaspar

Match Rank:7
Score:0.63
Offset:3
Orientation:forward strand
Alignment:AGATGAGTAAACAART
---TAAGTAAACAAA-
 C T G A T A C G G T C A A C G T C T A G C G T A C T A G A C G T C G T A T C G A C T G A T G A C C G T A C T G A C T A G C G A T
A C G T A C G T A C G T G C A T C T G A G C T A T C A G G A C T G T C A G T C A C T G A A G T C C T G A G C T A G C T A A C G T

Foxa2/MA0047.2/Jaspar

Match Rank:8
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:AGATGAGTAAACAART
-NCTAAGTAAACA---
 C T G A T A C G G T C A A C G T C T A G C G T A C T A G A C G T C G T A T C G A C T G A T G A C C G T A C T G A C T A G C G A T
A C G T T A G C G T A C G C A T T C G A C G T A C T A G A G C T G T C A T G C A C G T A A G T C C G T A A C G T A C G T A C G T

FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer

Match Rank:9
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:AGATGAGTAAACAART
----NDGTAAACARRN
 C T G A T A C G G T C A A C G T C T A G C G T A C T A G A C G T C G T A T C G A C T G A T G A C C G T A C T G A C T A G C G A T
A C G T A C G T A C G T A C G T G C A T C T A G T C A G A C G T C G T A C G T A C G T A A G T C C G T A T C A G T C A G C T G A

PB0015.1_Foxa2_1/Jaspar

Match Rank:10
Score:0.63
Offset:1
Orientation:forward strand
Alignment:AGATGAGTAAACAART--
-AAAAAGTAAACAAAGAC
 C T G A T A C G G T C A A C G T C T A G C G T A C T A G A C G T C G T A T C G A C T G A T G A C C G T A C T G A C T A G C G A T A C G T A C G T
A C G T G C T A C G T A G C T A C G T A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A G C T A C G T A T A C G C T G A A G T C