Information for 13-TCTATAAAGG (Motif 36)

A C G T A G T C A C G T C G T A A C G T C G T A C G T A C G T A A C T G A T C G
Reverse Opposite:
A T G C A G T C A C G T A C G T A C G T C G T A A C G T C G T A A C T G C G T A
p-value:1e-5
log p-value:-1.269e+01
Information Content per bp:1.960
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.54%
Number of Background Sequences with motif6.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets57.2 +/- 24.4bp
Average Position of motif in Background46.9 +/- 17.4bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL012.1_TATA-Box/Jaspar

Match Rank:1
Score:0.73
Offset:1
Orientation:forward strand
Alignment:TCTATAAAGG------
-GTATAAAAGGCGGGG
 A C G T A G T C A C G T C G T A A C G T C G T A C G T A C G T A A C T G A T C G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T T A C G A G C T C G T A G A C T C G T A C G T A C T G A C G T A T C A G T A C G T A G C T A C G T A C G A T C G T A C G

TBP/MA0108.2/Jaspar

Match Rank:2
Score:0.73
Offset:1
Orientation:forward strand
Alignment:TCTATAAAGG------
-GTATAAAAGGCGGGG
 A C G T A G T C A C G T C G T A A C G T C G T A C G T A C G T A A C T G A T C G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T T A C G A G C T C G T A G A C T C G T A C G T A C T G A C G T A T C A G T A C G T A G C T A C G T A C G A T C G T A C G

TATA-Box(TBP)/Promoter/Homer

Match Rank:3
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-TCTATAAAGG-
GNCTATAAAAGG
 A C G T A C G T A G T C A C G T C G T A A C G T C G T A C G T A C G T A A C T G A T C G A C G T
A T C G A T C G A T G C A G C T G C T A A C G T C G T A C G T A C T G A C T G A C T A G T A C G

CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer

Match Rank:4
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-TCTATAAAGG-
NGYCATAAAWCH
 A C G T A C G T A G T C A C G T C G T A A C G T C G T A C G T A C G T A A C T G A T C G A C G T
T A C G T C A G G A T C G T A C T C G A G A C T G C T A G C T A G C T A C G T A G A T C G T C A

CDX1/MA0878.1/Jaspar

Match Rank:5
Score:0.62
Offset:0
Orientation:forward strand
Alignment:TCTATAAAGG
GCAATAAAA-
 A C G T A G T C A C G T C G T A A C G T C G T A C G T A C G T A A C T G A T C G
T C A G G A T C G T C A T C G A G C A T G C T A C G T A G C T A G T C A A C G T

PH0078.1_Hoxd13/Jaspar

Match Rank:6
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---TCTATAAAGG---
CTACCAATAAAATTCT
 A C G T A C G T A C G T A C G T A G T C A C G T C G T A A C G T C G T A C G T A C G T A A C T G A T C G A C G T A C G T A C G T
G T A C C G A T G C T A A G T C G A T C G C T A C G T A A G C T C G T A C G T A C G T A G C T A G A C T G A C T G T A C G A C T

CDX2/MA0465.1/Jaspar

Match Rank:7
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--TCTATAAAGG
AAGCCATAAAA-
 A C G T A C G T A C G T A G T C A C G T C G T A A C G T C G T A C G T A C G T A A C T G A T C G
T C G A C T G A T C A G A G T C G T A C C G T A A C G T C G T A C G T A C G T A T C G A A C G T

PB0135.1_Hoxa3_2/Jaspar

Match Rank:8
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----TCTATAAAGG
AAAAACCATTAAGG
 A C G T A C G T A C G T A C G T A C G T A G T C A C G T C G T A A C G T C G T A C G T A C G T A A C T G A T C G
T C G A G T C A C T G A G C T A C G T A T G A C A G T C T G C A C G A T G C A T C G T A C T G A A T C G T C A G

MEF2A/MA0052.3/Jaspar

Match Rank:9
Score:0.60
Offset:0
Orientation:forward strand
Alignment:TCTATAAAGG--
TCTAAAAATAGA
 A C G T A G T C A C G T C G T A A C G T C G T A C G T A C G T A A C T G A T C G A C G T A C G T
C A G T G A T C A G C T G C T A C G T A G C T A C G T A G C T A A G C T G T C A C T A G G T C A

MEF2D/MA0773.1/Jaspar

Match Rank:10
Score:0.59
Offset:0
Orientation:forward strand
Alignment:TCTATAAAGG--
ACTATAAATAGA
 A C G T A G T C A C G T C G T A A C G T C G T A C G T A C G T A A C T G A T C G A C G T A C G T
C T G A G A T C G A C T G T C A C G A T G C T A C G T A G C T A A C G T C T G A T C A G G T C A