Information for 12-GCGGACGGCC (Motif 35)

A C T G A T G C A C T G A C T G C G T A A G T C A C T G A C T G A G T C A G T C
Reverse Opposite:
A C T G A C T G A G T C A G T C A C T G A C G T A G T C A G T C A T C G A G T C
p-value:1e-6
log p-value:-1.467e+01
Information Content per bp:1.963
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.67%
Number of Background Sequences with motif9.1
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets44.8 +/- 26.7bp
Average Position of motif in Background28.8 +/- 20.5bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HINFP/MA0131.2/Jaspar

Match Rank:1
Score:0.73
Offset:-2
Orientation:reverse strand
Alignment:--GCGGACGGCC
NCGCGGACGTTG
 A C G T A C G T A C T G A T G C A C T G A C T G C G T A A G T C A C T G A C T G A G T C A G T C
T G A C G T A C T A C G T A G C C T A G A T C G C G T A T A G C T A C G A G C T A C G T T A C G

ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GCGGACGGCC-
TGGGGAAGGGCM
 A C G T A C T G A T G C A C T G A C T G C G T A A G T C A C T G A C T G A G T C A G T C A C G T
G A C T C T A G C T A G C T A G A C T G T C G A C T G A C T A G C T A G C T A G G T A C G T C A

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GCGGACGGCC
CCAGACRSVB
 A C T G A T G C A C T G A C T G C G T A A G T C A C T G A C T G A G T C A G T C
T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C

PB0094.1_Zfp128_1/Jaspar

Match Rank:4
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---GCGGACGGCC----
TTNGGGTACGCCNNANN
 A C G T A C G T A C G T A C T G A T G C A C T G A C T G C G T A A G T C A C T G A C T G A G T C A G T C A C G T A C G T A C G T A C G T
G A C T C A G T C T G A T C A G A T C G A C T G A C G T C G T A A G T C C T A G G A T C G T A C G T C A G T C A C G T A C T A G T G C A

MZF1/MA0056.1/Jaspar

Match Rank:5
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GCGGACGGCC
TGGGGA-----
 A C G T A C T G A T G C A C T G A C T G C G T A A G T C A C T G A C T G A G T C A G T C
A G C T A C T G C T A G A C T G A C T G C T G A A C G T A C G T A C G T A C G T A C G T

PB0044.1_Mtf1_1/Jaspar

Match Rank:6
Score:0.57
Offset:-5
Orientation:reverse strand
Alignment:-----GCGGACGGCC-
NNTTTGCACACGGCCC
 A C G T A C G T A C G T A C G T A C G T A C T G A T G C A C T G A C T G C G T A A G T C A C T G A C T G A G T C A G T C A C G T
C G A T G A C T C A G T A C G T G A C T A C T G G A T C C T G A A G T C G C T A G A T C A C T G C T A G G A T C T A G C G T A C

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:7
Score:0.56
Offset:5
Orientation:forward strand
Alignment:GCGGACGGCC---
-----AGGCCTAG
 A C T G A T G C A C T G A C T G C G T A A G T C A C T G A C T G A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G

PB0010.1_Egr1_1/Jaspar

Match Rank:8
Score:0.55
Offset:-5
Orientation:reverse strand
Alignment:-----GCGGACGGCC
ANTGCGGGGGCGGN-
 A C G T A C G T A C G T A C G T A C G T A C T G A T G C A C T G A C T G C G T A A G T C A C T G A C T G A G T C A G T C
G T C A C T G A G C A T T C A G T G A C C A T G A C T G C T A G A T C G A C T G A G T C C T A G C A T G C T G A A C G T

ZNF669(Zf)/HEK293-ZNF669.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-GCGGACGGCC----
GGGCGATGACCAYTC
 A C G T A C T G A T G C A C T G A C T G C G T A A G T C A C T G A C T G A G T C A G T C A C G T A C G T A C G T A C G T
C T A G T A C G T C A G A G T C A C T G T G C A A G C T A C T G G T C A G T A C G A T C C T G A A G T C A C G T A T G C

PB0199.1_Zfp161_2/Jaspar

Match Rank:10
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---GCGGACGGCC-
GCCGCGCAGTGCGT
 A C G T A C G T A C G T A C T G A T G C A C T G A C T G C G T A A G T C A C T G A C T G A G T C A G T C A C G T
C A T G G A T C A G T C T A C G G A T C C T A G T G A C G T C A C T A G A C G T C T A G G T A C T C A G A G C T