Information for 16-GCAGACTGGCAAC (Motif 24)

A C T G A T G C G T C A C T A G C G T A A G T C A C G T A C T G A C T G A T G C C G T A G T C A A G T C
Reverse Opposite:
A C T G A C G T A C G T A T C G A G T C A G T C C G T A A C T G C G A T A G T C A C G T A T C G A G T C
p-value:1e-9
log p-value:-2.210e+01
Information Content per bp:1.909
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.67%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets52.7 +/- 31.0bp
Average Position of motif in Background61.8 +/- 4.8bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer

Match Rank:1
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GCAGACTGGCAAC-
TGTTKCCTAGCAACM
 A C G T A C T G A T G C G T C A C T A G C G T A A G T C A C G T A C T G A C T G A T G C C G T A G T C A A G T C A C G T
C A G T T C A G A G C T G A C T A C G T A G T C G A T C G A C T C T G A A C T G G A T C C G T A C T G A A G T C G T A C

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:2
Score:0.62
Offset:1
Orientation:forward strand
Alignment:GCAGACTGGCAAC-
-CTGTCTGTCACCT
 A C T G A T G C G T C A C T A G C G T A A G T C A C G T A C T G A C T G A T G C C G T A G T C A A G T C A C G T
A C G T T A G C G C A T T C A G A C G T A G T C A C G T T A C G C A G T A T G C G C T A T A G C G A T C G A C T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:3
Score:0.62
Offset:5
Orientation:forward strand
Alignment:GCAGACTGGCAAC
-----TTGCCAAG
 A C T G A T G C G T C A C T A G C G T A A G T C A C G T A C T G A C T G A T G C C G T A G T C A A G T C
A C G T A C G T A C G T A C G T A C G T A G C T A C G T A C T G A T G C A G T C C G T A C T G A T A C G

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.61
Offset:3
Orientation:forward strand
Alignment:GCAGACTGGCAAC--
---SCCTAGCAACAG
 A C T G A T G C G T C A C T A G C G T A A G T C A C G T A C T G A C T G A T G C C G T A G T C A A G T C A C G T A C G T
A C G T A C G T A C G T A T G C A G T C G T A C A G C T T C G A C T A G G A T C C T G A G T C A A G T C G C T A T C A G

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:GCAGACTGGCAAC-
--TGTCTGDCACCT
 A C T G A T G C G T C A C T A G C G T A A G T C A C G T A C T G A C T G A T G C C G T A G T C A A G T C A C G T
A C G T A C G T G C A T A C T G C G A T A G T C A C G T T A C G C A T G A G T C C G T A T A G C G A T C G A C T

NFIX/MA0671.1/Jaspar

Match Rank:6
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:GCAGACTGGCAAC
----NTTGGCANN
 A C T G A T G C G T C A C T A G C G T A A G T C A C G T A C T G A C T G A T G C C G T A G T C A A G T C
A C G T A C G T A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G

NFIC/MA0161.1/Jaspar

Match Rank:7
Score:0.60
Offset:5
Orientation:forward strand
Alignment:GCAGACTGGCAAC
-----TTGGCA--
 A C T G A T G C G T C A C T A G C G T A A G T C A C G T A C T G A C T G A T G C C G T A G T C A A G T C
A C G T A C G T A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T

Myb/MA0100.2/Jaspar

Match Rank:8
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GCAGACTGGCAAC
-CCAACTGCCA--
 A C T G A T G C G T C A C T A G C G T A A G T C A C G T A C T G A C T G A T G C C G T A G T C A A G T C
A C G T A G T C G A T C C G T A C T G A A G T C C G A T A C T G G A T C G T A C G C T A A C G T A C G T

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:9
Score:0.59
Offset:3
Orientation:forward strand
Alignment:GCAGACTGGCAAC
---VGCTGWCAVB
 A C T G A T G C G T C A C T A G C G T A A G T C A C G T A C T G A C T G A T G C C G T A G T C A A G T C
A C G T A C G T A C G T T C A G T A C G T A G C A C G T A C T G C G A T A G T C C G T A T A C G A G T C

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:10
Score:0.59
Offset:2
Orientation:forward strand
Alignment:GCAGACTGGCAAC
--GGTCTGGCAT-
 A C T G A T G C G T C A C T A G C G T A A G T C A C G T A C T G A C T G A T G C C G T A G T C A A G T C
A C G T A C G T A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T A C G T