Information for 19-CAGACAGGCAGTGAGC (Motif 23)

T G A C C G T A C T A G C T G A G T A C C G T A A C T G A C T G A G T C T C G A C T A G A C G T A T C G C G T A C T A G T A G C
Reverse Opposite:
A T C G G A T C A C G T A T G C T G C A A G T C A C G T C T A G G T A C A G T C C G A T A C T G A G C T A G T C A C G T A C T G
p-value:1e-9
log p-value:-2.235e+01
Information Content per bp:1.724
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.61%
Number of Background Sequences with motif56.7
Percentage of Background Sequences with motif0.12%
Average Position of motif in Targets59.6 +/- 29.0bp
Average Position of motif in Background47.5 +/- 30.6bp
Strand Bias (log2 ratio + to - strand density)1.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CAGACAGGCAGTGAGC
CCAGACAG---------
 A C G T T G A C C G T A C T A G C T G A G T A C C G T A A C T G A C T G A G T C T C G A C T A G A C G T A T C G C G T A C T A G T A G C
A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CAGACAGGCAGTGAGC
CCAGACRSVB-------
 A C G T T G A C C G T A C T A G C T G A G T A C C G T A A C T G A C T G A G T C T C G A C T A G A C G T A T C G C G T A C T A G T A G C
T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer

Match Rank:3
Score:0.59
Offset:3
Orientation:forward strand
Alignment:CAGACAGGCAGTGAGC
---ACAGGAAGTG---
 T G A C C G T A C T A G C T G A G T A C C G T A A C T G A C T G A G T C T C G A C T A G A C G T A T C G C G T A C T A G T A G C
A C G T A C G T A C G T T C G A T A G C T G C A A C T G A C T G C G T A C G T A C T A G G A C T T A C G A C G T A C G T A C G T

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:4
Score:0.57
Offset:3
Orientation:forward strand
Alignment:CAGACAGGCAGTGAGC
---ACAGGAAGTG---
 T G A C C G T A C T A G C T G A G T A C C G T A A C T G A C T G A G T C T C G A C T A G A C G T A T C G C G T A C T A G T A G C
A C G T A C G T A C G T T C G A T A G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T T C A G A C G T A C G T A C G T

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:5
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CAGACAGGCAGTGAGC
SCAGYCADGCATGAC--
 A C G T T G A C C G T A C T A G C T G A G T A C C G T A A C T G A C T G A G T C T C G A C T A G A C G T A T C G C G T A C T A G T A G C
A T C G G T A C C G T A A T C G A G C T A T G C C G T A C T A G A T C G A G T C T C G A C A G T T C A G T C G A T G A C A C G T A C G T

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:6
Score:0.56
Offset:2
Orientation:forward strand
Alignment:CAGACAGGCAGTGAGC
--AACAGGAAGT----
 T G A C C G T A C T A G C T G A G T A C C G T A A C T G A C T G A G T C T C G A C T A G A C G T A T C G C G T A C T A G T A G C
A C G T A C G T T G C A C T G A A T G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T A C G T A C G T A C G T A C G T

PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:7
Score:0.54
Offset:3
Orientation:forward strand
Alignment:CAGACAGGCAGTGAGC
---AGAGGAAGTG---
 T G A C C G T A C T A G C T G A G T A C C G T A A C T G A C T G A G T C T C G A C T A G A C G T A T C G C G T A C T A G T A G C
A C G T A C G T A C G T C G T A T A C G T C G A A C T G A C T G C G T A C G T A T A C G A G C T T A C G A C G T A C G T A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:8
Score:0.54
Offset:-6
Orientation:forward strand
Alignment:------CAGACAGGCAGTGAGC
CAAATCCAGACATCACA-----
 A C G T A C G T A C G T A C G T A C G T A C G T T G A C C G T A C T A G C T G A G T A C C G T A A C T G A C T G A G T C T C G A C T A G A C G T A T C G C G T A C T A G T A G C
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A A C G T A C G T A C G T A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:9
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-CAGACAGGCAGTGAGC
BCAGACWA---------
 A C G T T G A C C G T A C T A G C T G A G T A C C G T A A C T G A C T G A G T C T C G A C T A G A C G T A T C G C G T A C T A G T A G C
A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer

Match Rank:10
Score:0.53
Offset:2
Orientation:forward strand
Alignment:CAGACAGGCAGTGAGC
--NACAGGAAAT----
 T G A C C G T A C T A G C T G A G T A C C G T A A C T G A C T G A G T C T C G A C T A G A C G T A T C G C G T A C T A G T A G C
A C G T A C G T T G C A C T G A A G T C G T C A A C T G A C T G C G T A C G T A C T G A A G C T A C G T A C G T A C G T A C G T