Information for 13-TDTTGTTGGCATY (Motif 19)

G C A T C T A G C G A T A C G T C T A G G A C T A C G T A C T G T C A G A G T C G C T A C G A T A G T C
Reverse Opposite:
T C A G G C T A C G A T A C T G A G T C A G T C C G T A C T G A G A T C T G C A G C T A G A T C C G T A
p-value:1e-10
log p-value:-2.465e+01
Information Content per bp:1.634
Number of Target Sequences with motif38.0
Percentage of Target Sequences with motif5.09%
Number of Background Sequences with motif658.0
Percentage of Background Sequences with motif1.39%
Average Position of motif in Targets45.4 +/- 24.7bp
Average Position of motif in Background50.3 +/- 30.4bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIX/MA0671.1/Jaspar

Match Rank:1
Score:0.80
Offset:4
Orientation:reverse strand
Alignment:TDTTGTTGGCATY
----NTTGGCANN
 G C A T C T A G C G A T A C G T C T A G G A C T A C G T A C T G T C A G A G T C G C T A C G A T A G T C
A C G T A C G T A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G

NFIA/MA0670.1/Jaspar

Match Rank:2
Score:0.80
Offset:3
Orientation:reverse strand
Alignment:TDTTGTTGGCATY
---NNTTGGCANN
 G C A T C T A G C G A T A C G T C T A G G A C T A C G T A C T G T C A G A G T C G C T A C G A T A G T C
A C G T A C G T A C G T G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C

NFIC/MA0161.1/Jaspar

Match Rank:3
Score:0.78
Offset:5
Orientation:forward strand
Alignment:TDTTGTTGGCATY
-----TTGGCA--
 G C A T C T A G C G A T A C G T C T A G G A C T A C G T A C T G T C A G A G T C G C T A C G A T A G T C
A C G T A C G T A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T

Hic1/MA0739.1/Jaspar

Match Rank:4
Score:0.78
Offset:3
Orientation:reverse strand
Alignment:TDTTGTTGGCATY
---GGTTGGCAT-
 G C A T C T A G C G A T A C G T C T A G G A C T A C G T A C T G T C A G A G T C G C T A C G A T A G T C
A C G T A C G T A C G T T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T A C G T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:5
Score:0.77
Offset:4
Orientation:reverse strand
Alignment:TDTTGTTGGCATY
----CTTGGCAA-
 G C A T C T A G C G A T A C G T C T A G G A C T A C G T A C T G T C A G A G T C G C T A C G A T A G T C
A C G T A C G T A C G T A C G T A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A A C G T

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:6
Score:0.76
Offset:5
Orientation:forward strand
Alignment:TDTTGTTGGCATY
-----YTGWCADY
 G C A T C T A G C G A T A C G T C T A G G A C T A C G T A C T G T C A G A G T C G C T A C G A T A G T C
A C G T A C G T A C G T A C G T A C G T G A C T G C A T C T A G C G A T G A T C T C G A C A T G G A T C

MEIS3/MA0775.1/Jaspar

Match Rank:7
Score:0.73
Offset:5
Orientation:forward strand
Alignment:TDTTGTTGGCATY
-----TTGACAGG
 G C A T C T A G C G A T A C G T C T A G G A C T A C G T A C T G T C A G A G T C G C T A C G A T A G T C
A C G T A C G T A C G T A C G T A C G T C G A T G C A T A T C G C T G A G A T C C T G A A C T G A T C G

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:8
Score:0.72
Offset:3
Orientation:reverse strand
Alignment:TDTTGTTGGCATY
---ARNTGACA--
 G C A T C T A G C G A T A C G T C T A G G A C T A C G T A C T G T C A G A G T C G C T A C G A T A G T C
A C G T A C G T A C G T T G C A C T A G G A T C A C G T C T A G C G T A G T A C T C G A A C G T A C G T

PB0029.1_Hic1_1/Jaspar

Match Rank:9
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-TDTTGTTGGCATY--
NGTAGGTTGGCATNNN
 A C G T G C A T C T A G C G A T A C G T C T A G G A C T A C G T A C T G T C A G A G T C G C T A C G A T A G T C A C G T A C G T
C T A G C T A G A G C T C G T A T C A G T C A G A C G T C A G T A C T G A T C G A G T C C G T A G A C T T G C A T C A G G C A T

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:10
Score:0.72
Offset:1
Orientation:forward strand
Alignment:TDTTGTTGGCATY
-GGTGYTGACAGS
 G C A T C T A G C G A T A C G T C T A G G A C T A C G T A C T G T C A G A G T C G C T A C G A T A G T C
A C G T T C A G A T C G G A C T A C T G G A C T C A G T C T A G C G T A G T A C C G T A C T A G A T C G