Information for 13-GRMTCCKGCKTGGCWT (Motif 17)

A C T G C T G A G T A C A C G T A G T C A G T C C A G T A C T G A G T C A C G T A C G T C T A G A C T G A G T C C G A T C G A T
Reverse Opposite:
C G T A C G T A C T A G G T A C A G T C C G T A G T C A A C T G A G T C G T A C A C T G A C T G C G T A A C T G A G C T A G T C
p-value:1e-11
log p-value:-2.555e+01
Information Content per bp:1.856
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.67%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets39.5 +/- 11.6bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:1
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GRMTCCKGCKTGGCWT
GGCCYCCTGCTGDGH--
 A C G T A C T G C T G A G T A C A C G T A G T C A G T C C A G T A C T G A G T C A C G T A C G T C T A G A C T G A G T C C G A T C G A T
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:2
Score:0.56
Offset:8
Orientation:reverse strand
Alignment:GRMTCCKGCKTGGCWT-
--------NTTGGCANN
 A C T G C T G A G T A C A C G T A G T C A G T C C A G T A C T G A G T C A C G T A C G T C T A G A C T G A G T C C G A T C G A T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G

NFIC/MA0161.1/Jaspar

Match Rank:3
Score:0.55
Offset:9
Orientation:forward strand
Alignment:GRMTCCKGCKTGGCWT
---------TTGGCA-
 A C T G C T G A G T A C A C G T A G T C A G T C C A G T A C T G A G T C A C G T A C G T C T A G A C T G A G T C C G A T C G A T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A A C G T

PB0029.1_Hic1_1/Jaspar

Match Rank:4
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:GRMTCCKGCKTGGCWT---
---NGTAGGTTGGCATNNN
 A C T G C T G A G T A C A C G T A G T C A G T C C A G T A C T G A G T C A C G T A C G T C T A G A C T G A G T C C G A T C G A T A C G T A C G T A C G T
A C G T A C G T A C G T C T A G C T A G A G C T C G T A T C A G T C A G A C G T C A G T A C T G A T C G A G T C C G T A G A C T T G C A T C A G G C A T

Hic1/MA0739.1/Jaspar

Match Rank:5
Score:0.54
Offset:7
Orientation:reverse strand
Alignment:GRMTCCKGCKTGGCWT
-------GGTTGGCAT
 A C T G C T G A G T A C A C G T A G T C A G T C C A G T A C T G A G T C A C G T A C G T C T A G A C T G A G T C C G A T C G A T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:6
Score:0.54
Offset:0
Orientation:forward strand
Alignment:GRMTCCKGCKTGGCWT
ACATCCTGNT------
 A C T G C T G A G T A C A C G T A G T C A G T C C A G T A C T G A G T C A C G T A C G T C T A G A C T G A G T C C G A T C G A T
C T G A A T G C C G T A A C G T A G T C A G T C A C G T A C T G A T C G G C A T A C G T A C G T A C G T A C G T A C G T A C G T

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:7
Score:0.54
Offset:6
Orientation:forward strand
Alignment:GRMTCCKGCKTGGCWT
------TGCGTG----
 A C T G C T G A G T A C A C G T A G T C A G T C C A G T A C T G A G T C A C G T A C G T C T A G A C T G A G T C C G A T C G A T
A C G T A C G T A C G T A C G T A C G T A C G T G A C T A C T G A G T C A C T G A C G T A C T G A C G T A C G T A C G T A C G T

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:8
Score:0.53
Offset:2
Orientation:forward strand
Alignment:GRMTCCKGCKTGGCWT-
--GTCATGCHTGRCTGS
 A C T G C T G A G T A C A C G T A G T C A G T C C A G T A C T G A G T C A C G T A C G T C T A G A C T G A G T C C G A T C G A T A C G T
A C G T A C G T A C T G A G C T A G T C G T C A A G C T T C A G A T G C G A T C G C A T A T C G T C G A T A G C C G A T C A T G T A G C

NFIA/MA0670.1/Jaspar

Match Rank:9
Score:0.52
Offset:7
Orientation:reverse strand
Alignment:GRMTCCKGCKTGGCWT-
-------NNTTGGCANN
 A C T G C T G A G T A C A C G T A G T C A G T C C A G T A C T G A G T C A C G T A C G T C T A G A C T G A G T C C G A T C G A T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:10
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:GRMTCCKGCKTGGCWT
-CCCCCTGCTGTG---
 A C T G C T G A G T A C A C G T A G T C A G T C C A G T A C T G A G T C A C G T A C G T C T A G A C T G A G T C C G A T C G A T
A C G T G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T A C G T A C G T