Information for 10-CGTTGCATGA (Motif 13)

G T A C A C T G C A G T A C G T C T A G A T G C G T C A A C G T A T C G C G T A
Reverse Opposite:
C G A T A T G C C G T A C A G T A T C G G A T C G T C A G T C A A G T C A C T G
p-value:1e-9
log p-value:-2.152e+01
Information Content per bp:1.884
Number of Target Sequences with motif30.0
Percentage of Target Sequences with motif3.16%
Number of Background Sequences with motif360.2
Percentage of Background Sequences with motif0.80%
Average Position of motif in Targets60.6 +/- 24.1bp
Average Position of motif in Background50.5 +/- 28.9bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer

Match Rank:1
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:CGTTGCATGA-
-ATTGCATCAK
 G T A C A C T G C A G T A C G T C T A G A T G C G T C A A C G T A T C G C G T A A C G T
A C G T T C G A A C G T A C G T C T A G A G T C T C G A G C A T G T A C C T G A A C G T

Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:2
Score:0.68
Offset:1
Orientation:forward strand
Alignment:CGTTGCATGA-
-ATTGCATCAT
 G T A C A C T G C A G T A C G T C T A G A T G C G T C A A C G T A T C G C G T A A C G T
A C G T T C G A G C A T A C G T C T A G G T A C T C G A G C A T T G A C T C G A A C G T

HLF(bZIP)/HSC-HLF.Flag-ChIP-Seq(GSE69817)/Homer

Match Rank:3
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:CGTTGCATGA-
-VTTRCATAAY
 G T A C A C T G C A G T A C G T C T A G A T G C G T C A A C G T A T C G C G T A A C G T
A C G T T C A G G A C T A C G T C T G A G A T C T C G A G A C T G T C A C T G A A G T C

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:4
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:CGTTGCATGA--
--TTGCGTGCVA
 G T A C A C T G C A G T A C G T C T A G A T G C G T C A A C G T A T C G C G T A A C G T A C G T
A C G T A C G T A C G T C A G T A C T G A G T C T C A G C G A T C A T G G T A C T A G C C G T A

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:5
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:CGTTGCATGA--
--TTGCAACATN
 G T A C A C T G C A G T A C G T C T A G A T G C G T C A A C G T A T C G C G T A A C G T A C G T
A C G T A C G T C A G T A C G T C T A G A G T C G T C A C G T A G A T C G C T A A G C T G A T C

MF0006.1_bZIP_cEBP-like_subclass/Jaspar

Match Rank:6
Score:0.63
Offset:1
Orientation:forward strand
Alignment:CGTTGCATGA
-ATTGCATAA
 G T A C A C T G C A G T A C G T C T A G A T G C G T C A A C G T A T C G C G T A
A C G T T C G A G A C T A C G T C T A G G A T C T C G A G A C T G T C A G C T A

Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:CGTTGCATGA---
-GTGGCGTGACNG
 G T A C A C T G C A G T A C G T C T A G A T G C G T C A A C G T A T C G C G T A A C G T A C G T A C G T
A C G T T C A G A C G T C A T G A C T G A T G C A T C G A C G T A T C G C T G A A G T C G A T C C A T G

ATF4/MA0833.1/Jaspar

Match Rank:8
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:CGTTGCATGA---
TATTGCATCATCC
 G T A C A C T G C A G T A C G T C T A G A T G C G T C A A C G T A T C G C G T A A C G T A C G T A C G T
A C G T T C G A C G A T C A G T C T A G G T A C T C G A C G A T G A T C G T C A A C G T G T A C G A T C

CEBPA/MA0102.3/Jaspar

Match Rank:9
Score:0.61
Offset:1
Orientation:forward strand
Alignment:CGTTGCATGA--
-ATTGCACAATA
 G T A C A C T G C A G T A C G T C T A G A T G C G T C A A C G T A T C G C G T A A C G T A C G T
A C G T T C G A A C G T A C G T C A T G A G T C T G C A G A T C G T C A C G T A A G C T G T C A

PB0178.1_Sox8_2/Jaspar

Match Rank:10
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CGTTGCATGA----
NNTNTCATGAATGT
 G T A C A C T G C A G T A C G T C T A G A T G C G T C A A C G T A T C G C G T A A C G T A C G T A C G T A C G T
A T G C T A C G C A G T A C T G C G A T G A T C T G C A A G C T C T A G C G T A T C G A C G A T C T A G G A C T