Information for 12-GCCGSSAGCAGCA (Motif 29)

A C T G A G T C G T A C A T C G T A C G T A C G C T G A C T A G A G T C C T G A A C T G A T G C G T C A
Reverse Opposite:
A C G T A T C G A G T C A G C T A C T G A G T C A G C T A T G C A T G C T A G C A C T G C T A G G T A C
p-value:1e-3
log p-value:-8.724e+00
Information Content per bp:1.700
Number of Target Sequences with motif43.0
Percentage of Target Sequences with motif4.49%
Number of Background Sequences with motif1101.9
Percentage of Background Sequences with motif2.46%
Average Position of motif in Targets48.8 +/- 28.8bp
Average Position of motif in Background49.4 +/- 32.4bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TFAP2A/MA0003.3/Jaspar

Match Rank:1
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GCCGSSAGCAGCA
CGCCTCAGGCA---
 A C G T A C T G A G T C G T A C A T C G T A C G T A C G C T G A C T A G A G T C C T G A A C T G A T G C G T C A
G T A C T A C G A T G C A G T C A G C T T A G C T G C A T C A G A T C G T A G C C G T A A C G T A C G T A C G T

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:2
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GCCGSSAGCAGCA
AGCCTCAGGCA---
 A C G T A C T G A G T C G T A C A T C G T A C G T A C G C T G A C T A G A G T C C T G A A C T G A T G C G T C A
G T C A T A C G A T G C A G T C A G C T T A G C T C G A T C A G A T C G T A G C C G T A A C G T A C G T A C G T

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:3
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GCCGSSAGCAGCA
AGCCTCAGGCA---
 A C G T A C T G A G T C G T A C A T C G T A C G T A C G C T G A C T A G A G T C C T G A A C T G A T G C G T C A
G T C A T A C G A T G C A G T C A G C T T A G C T G C A T C A G T A C G T A G C C G T A A C G T A C G T A C G T

PB0190.1_Tcfap2b_2/Jaspar

Match Rank:4
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---GCCGSSAGCAGCA
ATTGCCTCAGGCAAT-
 A C G T A C G T A C G T A C T G A G T C G T A C A T C G T A C G T A C G C T G A C T A G A G T C C T G A A C T G A T G C G T C A
C G T A C A G T G C A T T C A G G A T C G T A C A C G T A T G C G T C A C T A G C A T G G T A C C T G A G T C A G C A T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:5
Score:0.57
Offset:6
Orientation:reverse strand
Alignment:GCCGSSAGCAGCA
------CACAGN-
 A C T G A G T C G T A C A T C G T A C G T A C G C T G A C T A G A G T C C T G A A C T G A T G C G T C A
A C G T A C G T A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:6
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---GCCGSSAGCAGCA
ATTGCCTGAGGCAAT-
 A C G T A C G T A C G T A C T G A G T C G T A C A T C G T A C G T A C G C T G A C T A G A G T C C T G A A C T G A T G C G T C A
G C T A G C A T G C A T A T C G A G T C A G T C A G C T A T C G T C G A T C A G A C T G T A G C C T A G G C T A C G A T A C G T

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.54
Offset:3
Orientation:forward strand
Alignment:GCCGSSAGCAGCA
---TGGAACAGMA
 A C T G A G T C G T A C A T C G T A C G T A C G C T G A C T A G A G T C C T G A A C T G A T G C G T C A
A C G T A C G T A C G T C A G T A C T G T C A G T G C A G C T A A T G C T C G A A T C G G T C A T G C A

E2F4/MA0470.1/Jaspar

Match Rank:8
Score:0.54
Offset:5
Orientation:forward strand
Alignment:GCCGSSAGCAGCA---
-----GGGCGGGAAGG
 A C T G A G T C G T A C A T C G T A C G T A C G C T G A C T A G A G T C C T G A A C T G A T G C G T C A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C T G T A C G A T C G A G T C A C T G T A C G T A C G C T G A C T G A T C A G T C A G

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:9
Score:0.53
Offset:1
Orientation:forward strand
Alignment:GCCGSSAGCAGCA
-CCAGGAACAG--
 A C T G A G T C G T A C A T C G T A C G T A C G C T G A C T A G A G T C C T G A A C T G A T G C G T C A
A C G T T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T A C G T

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.53
Offset:6
Orientation:forward strand
Alignment:GCCGSSAGCAGCA---
------GGCGGGAARN
 A C T G A G T C G T A C A T C G T A C G T A C G C T G A C T A G A G T C C T G A A C T G A T G C G T C A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A C G T A C G G T A C A T C G A C T G T A C G T C G A C T G A T C G A A T C G