Information for 16-CTAAGGGAGC (Motif 26)

A G T C A C G T C G T A C G T A A C T G T A C G A C T G G T C A A C T G A G T C
Reverse Opposite:
A C T G A G T C A C G T A G T C A G T C A G T C C G A T A C G T C G T A A C T G
p-value:1e-6
log p-value:-1.595e+01
Information Content per bp:1.908
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.73%
Number of Background Sequences with motif17.6
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets45.4 +/- 22.4bp
Average Position of motif in Background32.1 +/- 26.8bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer

Match Rank:1
Score:0.67
Offset:0
Orientation:forward strand
Alignment:CTAAGGGAGC
CTAATKGV--
 A G T C A C G T C G T A C G T A A C T G T A C G A C T G G T C A A C T G A G T C
A G T C C G A T C T G A C G T A A C G T C A G T T C A G T G A C A C G T A C G T

POL013.1_MED-1/Jaspar

Match Rank:2
Score:0.66
Offset:4
Orientation:reverse strand
Alignment:CTAAGGGAGC
----CGGAGC
 A G T C A C G T C G T A C G T A A C T G T A C G A C T G G T C A A C T G A G T C
A C G T A C G T A C G T A C G T A T G C A C T G A C T G C G T A A C T G A G T C

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:CTAAGGGAGC----
----GGGAGGACNG
 A G T C A C G T C G T A C G T A A C T G T A C G A C T G G T C A A C T G A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T A G A C T G A C T G C G T A A C T G A T C G C G T A A T G C A G C T T A C G

POL010.1_DCE_S_III/Jaspar

Match Rank:4
Score:0.57
Offset:6
Orientation:forward strand
Alignment:CTAAGGGAGC-
------CAGCC
 A G T C A C G T C G T A C G T A A C T G T A C G A C T G G T C A A C T G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C

Znf423/MA0116.1/Jaspar

Match Rank:5
Score:0.55
Offset:-5
Orientation:forward strand
Alignment:-----CTAAGGGAGC
GGCACCCAGGGGTGC
 A C G T A C G T A C G T A C G T A C G T A G T C A C G T C G T A C G T A A C T G T A C G A C T G G T C A A C T G A G T C
T C A G A T C G G T A C G T C A A G T C A G T C G A T C C G T A C T A G A C T G A C T G A C T G A C G T A C T G G T A C

HLTF/MA0109.1/Jaspar

Match Rank:6
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--CTAAGGGAGC
NNATAAGGNN--
 A C G T A C G T A G T C A C G T C G T A C G T A A C T G T A C G A C T G G T C A A C T G A G T C
C G T A A C G T G T C A G C A T C G T A C G T A A C T G A C T G C G A T G C A T A C G T A C G T

PB0009.1_E2F3_1/Jaspar

Match Rank:7
Score:0.54
Offset:0
Orientation:forward strand
Alignment:CTAAGGGAGC-----
ATAAGGGCGCGCGAT
 A G T C A C G T C G T A C G T A A C T G T A C G A C T G G T C A A C T G A G T C A C G T A C G T A C G T A C G T A C G T
T C G A G C A T C G T A G C T A C T A G T A C G T A C G T A G C A T C G A T G C A T C G G A T C A T C G G C T A G C A T

PB0076.1_Sp4_1/Jaspar

Match Rank:8
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-CTAAGGGAGC------
NNNAAGGGGGCGGGNNN
 A C G T A G T C A C G T C G T A C G T A A C T G T A C G A C T G G T C A A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T
T A C G T C G A A T C G C T G A C T G A C T A G C A T G C T A G A T C G A C T G G A T C A C T G A C T G C A T G C T G A G A T C T G A C

Barhl1/MA0877.1/Jaspar

Match Rank:9
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-CTAAGGGAGC
GCTAATTGCT-
 A C G T A G T C A C G T C G T A C G T A A C T G T A C G A C T G G T C A A C T G A G T C
A T C G G A T C G C A T C G T A C T G A C G A T A G C T C T A G A T G C A G C T A C G T

NKX3-2/MA0122.2/Jaspar

Match Rank:10
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:CTAAGGGAGC
TTAAGTGGN-
 A G T C A C G T C G T A C G T A A C T G T A C G A C T G G T C A A C T G A G T C
G A C T C G A T C T G A T C G A C A T G C G A T C T A G A T C G A G C T A C G T