Information for 14-GSCGGGAAGGCGGRKC (Motif 27)

A C T G T A C G A T G C C T A G T A C G A C T G C T G A C T G A A T C G A C T G A G T C C T A G A T C G T C A G A C G T A T G C
Reverse Opposite:
A T C G G T C A A G T C A T G C A G T C A C T G A G T C A T G C A G C T A G C T A G T C A G T C A G T C A T C G A T G C A G T C
p-value:1e-8
log p-value:-1.893e+01
Information Content per bp:1.766
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.15%
Number of Background Sequences with motif37.7
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets42.4 +/- 21.8bp
Average Position of motif in Background53.1 +/- 34.0bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SP2/MA0516.1/Jaspar

Match Rank:1
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:GSCGGGAAGGCGGRKC
-GGGNGGGGGCGGGGC
 A C T G T A C G A T G C C T A G T A C G A C T G C T G A C T G A A T C G A C T G A G T C C T A G A T C G T C A G A C G T A T G C
A C G T T A C G T A C G T A C G T C G A C T A G C T A G C T A G C T A G A C T G G T A C C T A G A T C G C T A G T C A G T A G C

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:2
Score:0.65
Offset:4
Orientation:forward strand
Alignment:GSCGGGAAGGCGGRKC
----RGKGGGCGGAGC
 A C T G T A C G A T G C C T A G T A C G A C T G C T G A C T G A A T C G A C T G A G T C C T A G A T C G T C A G A C G T A T G C
A C G T A C G T A C G T A C G T C T G A T C A G C A G T C T A G A C T G C T A G G A T C A T C G A C T G C T G A T C A G G A T C

Sp1(Zf)/Promoter/Homer

Match Rank:3
Score:0.63
Offset:5
Orientation:reverse strand
Alignment:GSCGGGAAGGCGGRKC-
-----GGGGGCGGGGCC
 A C T G T A C G A T G C C T A G T A C G A C T G C T G A C T G A A T C G A C T G A G T C C T A G A T C G T C A G A C G T A T G C A C G T
A C G T A C G T A C G T A C G T A C G T T C A G C A T G C T A G A C T G A C T G A G T C A C T G A C T G C T A G T A C G A G T C A T G C

E2F4/MA0470.1/Jaspar

Match Rank:4
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GSCGGGAAGGCGGRKC
GGGCGGGAAGG------
 A C G T A C T G T A C G A T G C C T A G T A C G A C T G C T G A C T G A A T C G A C T G A G T C C T A G A T C G T C A G A C G T A T G C
A C T G T A C G A T C G A G T C A C T G T A C G T A C G C T G A C T G A T C A G T C A G A C G T A C G T A C G T A C G T A C G T A C G T

EGR1/MA0162.2/Jaspar

Match Rank:5
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:GSCGGGAAGGCGGRKC
--GGCGGGGGCGGGGG
 A C T G T A C G A T G C C T A G T A C G A C T G C T G A C T G A A T C G A C T G A G T C C T A G A T C G T C A G A C G T A T G C
A C G T A C G T A C T G T A C G G T A C C T A G C A T G T C A G C T A G A C T G G A T C C T A G C A T G T C A G C T A G T A C G

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:6
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--GSCGGGAAGGCGGRKC
CWGGCGGGAA--------
 A C G T A C G T A C T G T A C G A T G C C T A G T A C G A C T G C T G A C T G A A T C G A C T G A G T C C T A G A T C G T C A G A C G T A T G C
T A G C C G A T T A C G A C T G A G T C A C T G A T C G A T C G C G T A C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

SP1/MA0079.3/Jaspar

Match Rank:7
Score:0.62
Offset:5
Orientation:reverse strand
Alignment:GSCGGGAAGGCGGRKC
-----GGGGGCGGGGC
 A C T G T A C G A T G C C T A G T A C G A C T G C T G A C T G A A T C G A C T G A G T C C T A G A T C G T C A G A C G T A T G C
A C G T A C G T A C G T A C G T A C G T T C A G C T A G C T A G A C T G A C T G G T A C C T A G A C T G C T A G T C A G T G A C

POL003.1_GC-box/Jaspar

Match Rank:8
Score:0.61
Offset:4
Orientation:forward strand
Alignment:GSCGGGAAGGCGGRKC--
----AGGGGGCGGGGCTG
 A C T G T A C G A T G C C T A G T A C G A C T G C T G A C T G A A T C G A C T G A G T C C T A G A T C G T C A G A C G T A T G C A C G T A C G T
A C G T A C G T A C G T A C G T C G T A C T A G C A T G T C A G A C T G C T A G G T A C C T A G A C T G C T A G C A T G A G T C A G C T C A T G

E2F6/MA0471.1/Jaspar

Match Rank:9
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GSCGGGAAGGCGGRKC
GGGCGGGAAGG------
 A C G T A C T G T A C G A T G C C T A G T A C G A C T G C T G A C T G A A T C G A C T G A G T C C T A G A T C G T C A G A C G T A T G C
C T A G T C A G A C T G G T A C C T A G A C T G T A C G C G T A C T G A T C A G T C A G A C G T A C G T A C G T A C G T A C G T A C G T

PB0164.1_Smad3_2/Jaspar

Match Rank:10
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:GSCGGGAAGGCGGRKC---
--NAGANTGGCGGGGNGNA
 A C T G T A C G A T G C C T A G T A C G A C T G C T G A C T G A A T C G A C T G A G T C C T A G A T C G T C A G A C G T A T G C A C G T A C G T A C G T
A C G T A C G T T G A C C T G A T C A G C T G A C A T G A C G T C A T G T C A G A T G C T A C G A T C G T C A G C T A G T A G C C A T G C A G T G T C A