Information for 13-CTAAGRKAGC (Motif 21)

A G T C A C G T G T C A C G T A A C T G C T A G A C T G C G T A A C T G A G T C
Reverse Opposite:
A C T G A G T C A C G T G T A C A G T C A G T C A C G T A C G T C G T A A C T G
p-value:1e-8
log p-value:-1.966e+01
Information Content per bp:1.913
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.52%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets40.0 +/- 22.7bp
Average Position of motif in Background46.9 +/- 15.9bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer

Match Rank:1
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CTAAGRKAGC
CTAATKGV--
 A G T C A C G T G T C A C G T A A C T G C T A G A C T G C G T A A C T G A G T C
A G T C C G A T C T G A C G T A A C G T C A G T T C A G T G A C A C G T A C G T

PB0154.1_Osr1_2/Jaspar

Match Rank:2
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--CTAAGRKAGC----
NNNTTAGGTAGCNTNT
 A C G T A C G T A G T C A C G T G T C A C G T A A C T G C T A G A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T
A C T G C A G T G C T A C A G T A G C T C G T A C T A G A C T G C G A T C T G A C T A G A G T C C T G A C G A T C T A G G A C T

POL013.1_MED-1/Jaspar

Match Rank:3
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:CTAAGRKAGC
----CGGAGC
 A G T C A C G T G T C A C G T A A C T G C T A G A C T G C G T A A C T G A G T C
A C G T A C G T A C G T A C G T A T G C A C T G A C T G C G T A A C T G A G T C

POL010.1_DCE_S_III/Jaspar

Match Rank:4
Score:0.58
Offset:6
Orientation:forward strand
Alignment:CTAAGRKAGC-
------CAGCC
 A G T C A C G T G T C A C G T A A C T G C T A G A C T G C G T A A C T G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C

PB0051.1_Osr2_1/Jaspar

Match Rank:5
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--CTAAGRKAGC----
ATGTACAGTAGCAAAG
 A C G T A C G T A G T C A C G T G T C A C G T A A C T G C T A G A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T
G C A T C G A T T C A G G C A T G T C A G A T C C T G A A C T G C G A T C T G A A C T G A G T C G C T A G T C A G C T A C T A G

MafK(bZIP)/C2C12-MafK-ChIP-Seq(GSE36030)/Homer

Match Rank:6
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--CTAAGRKAGC
TGCTGASTCAGC
 A C G T A C G T A G T C A C G T G T C A C G T A A C T G C T A G A C T G C G T A A C T G A G T C
A C G T A T C G T G A C G C A T C A T G C G T A T A G C G A C T G A T C C T G A A T C G A G T C

HLTF/MA0109.1/Jaspar

Match Rank:7
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--CTAAGRKAGC
NNATAAGGNN--
 A C G T A C G T A G T C A C G T G T C A C G T A A C T G C T A G A C T G C G T A A C T G A G T C
C G T A A C G T G T C A G C A T C G T A C G T A A C T G A C T G C G A T G C A T A C G T A C G T

Znf423/MA0116.1/Jaspar

Match Rank:8
Score:0.54
Offset:-5
Orientation:forward strand
Alignment:-----CTAAGRKAGC
GGCACCCAGGGGTGC
 A C G T A C G T A C G T A C G T A C G T A G T C A C G T G T C A C G T A A C T G C T A G A C T G C G T A A C T G A G T C
T C A G A T C G G T A C G T C A A G T C A G T C G A T C C G T A C T A G A C T G A C T G A C T G A C G T A C T G G T A C

PB0126.1_Gata5_2/Jaspar

Match Rank:9
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--CTAAGRKAGC-----
GACAGAGATATCAGTGT
 A C G T A C G T A G T C A C G T G T C A C G T A A C T G C T A G A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T
T C A G T G C A A G T C G T C A C T A G G T C A C A T G T C G A C A G T G T C A C A G T G A T C C G T A C T A G G A C T A C G T A C G T

PB0050.1_Osr1_1/Jaspar

Match Rank:10
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--CTAAGRKAGC----
ATTTACAGTAGCAAAA
 A C G T A C G T A G T C A C G T G T C A C G T A A C T G C T A G A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T
G C A T G C A T C G A T G C A T G T C A G A T C C T G A A C T G C G A T C T G A C T A G A G T C G C T A T G C A G C T A C T G A