Information for 14-TCTCGCCAGACGG (Motif 18)

A C G T A T G C A C G T A G T C C T A G A G T C A T G C C G T A A C T G C T G A A G T C C T A G T A C G
Reverse Opposite:
A G T C A G T C A C T G A G C T A G T C C G A T A T C G A C T G A G T C C T A G G T C A A T C G C G T A
p-value:1e-9
log p-value:-2.095e+01
Information Content per bp:1.820
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.84%
Number of Background Sequences with motif11.2
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets58.0 +/- 26.4bp
Average Position of motif in Background51.7 +/- 26.4bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GFX(?)/Promoter/Homer

Match Rank:1
Score:0.79
Offset:-2
Orientation:forward strand
Alignment:--TCTCGCCAGACGG
ATTCTCGCGAGA---
 A C G T A C G T A C G T A T G C A C G T A G T C C T A G A G T C A T G C C G T A A C T G C T G A A G T C C T A G T A C G
T C G A G A C T A G C T T G A C A G C T G T A C T C A G G A T C A T C G T G C A A C T G C T G A A C G T A C G T A C G T

ZBTB33(Zf)/GM12878-ZBTB33-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.74
Offset:-2
Orientation:reverse strand
Alignment:--TCTCGCCAGACGG
GTTCTCGCGAGANCC
 A C G T A C G T A C G T A T G C A C G T A G T C C T A G A G T C A T G C C G T A A C T G C T G A A G T C C T A G T A C G
T A C G G A C T G A C T T G A C A G C T A G T C C A T G G T A C A C T G T C G A A C T G T C G A A C G T A G T C A T G C

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.72
Offset:5
Orientation:reverse strand
Alignment:TCTCGCCAGACGG
-----CCAGACAG
 A C G T A T G C A C G T A G T C C T A G A G T C A T G C C G T A A C T G C T G A A G T C C T A G T A C G
A C G T A C G T A C G T A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G

ZBTB33/MA0527.1/Jaspar

Match Rank:4
Score:0.72
Offset:-4
Orientation:reverse strand
Alignment:----TCTCGCCAGACGG
NAGNTCTCGCGAGAN--
 A C G T A C G T A C G T A C G T A C G T A T G C A C G T A G T C C T A G A G T C A T G C C G T A A C T G C T G A A G T C C T A G T A C G
T A G C T C G A T C A G T C G A A G C T T G A C A G C T A G T C C T A G G A T C A C T G C T G A A C T G T C G A T C A G A C G T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.71
Offset:5
Orientation:reverse strand
Alignment:TCTCGCCAGACGG--
-----CCAGACRSVB
 A C G T A T G C A C G T A G T C C T A G A G T C A T G C C G T A A C T G C T G A A G T C C T A G T A C G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:6
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:TCTCGCCAGACGG
--ATGCCAGACN-
 A C G T A T G C A C G T A G T C C T A G A G T C A T G C C G T A A C T G C T G A A G T C C T A G T A C G
A C G T A C G T C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:7
Score:0.65
Offset:0
Orientation:forward strand
Alignment:TCTCGCCAGACGG----
CAAATCCAGACATCACA
 A C G T A T G C A C G T A G T C C T A G A G T C A T G C C G T A A C T G C T G A A G T C C T A G T A C G A C G T A C G T A C G T A C G T
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:8
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-TCTCGCCAGACGG
TTCCCGCCWG----
 A C G T A C G T A T G C A C G T A G T C C T A G A G T C A T G C C G T A A C T G C T G A A G T C C T A G T A C G
A G C T A C G T A T G C A T G C A G T C A C T G A G T C A T G C G C T A A T C G A C G T A C G T A C G T A C G T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:9
Score:0.59
Offset:0
Orientation:forward strand
Alignment:TCTCGCCAGACGG
AGGTGHCAGACA-
 A C G T A T G C A C G T A G T C C T A G A G T C A T G C C G T A A C T G C T G A A G T C C T A G T A C G
C T G A C T A G A T C G G C A T A C T G G T A C A T G C C G T A A C T G G C T A A G T C C G T A A C G T

PAX1/MA0779.1/Jaspar

Match Rank:10
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----TCTCGCCAGACGG
NGCANTCATGCGTGACG-
 A C G T A C G T A C G T A C G T A C G T A C G T A T G C A C G T A G T C C T A G A G T C A T G C C G T A A C T G C T G A A G T C C T A G T A C G
C A G T A C T G G T A C C T G A A T C G A G C T T A G C C T G A C G A T A T C G G A T C C T A G A C G T C T A G C G T A G T A C T A C G A C G T