Information for 4-GGAGCCAATA (Motif 6)

C A T G T A C G T G C A C A T G A T G C T G A C T G C A C T G A G A C T T C G A
Reverse Opposite:
A G C T C T G A G A C T A C G T A C T G A T C G G T A C A C G T A T G C G T A C
p-value:1e-14
log p-value:-3.228e+01
Information Content per bp:1.674
Number of Target Sequences with motif58.0
Percentage of Target Sequences with motif6.20%
Number of Background Sequences with motif848.6
Percentage of Background Sequences with motif1.88%
Average Position of motif in Targets50.6 +/- 29.9bp
Average Position of motif in Background50.1 +/- 32.4bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFY(CCAAT)/Promoter/Homer

Match Rank:1
Score:0.75
Offset:2
Orientation:forward strand
Alignment:GGAGCCAATA--
--AGCCAATCGG
 C A T G T A C G T G C A C A T G A T G C T G A C T G C A C T G A G A C T T C G A A C G T A C G T
A C G T A C G T T C G A C T A G A G T C A G T C C G T A C G T A A C G T T A G C T C A G T A C G

NFIC/MA0161.1/Jaspar

Match Rank:2
Score:0.74
Offset:2
Orientation:reverse strand
Alignment:GGAGCCAATA
--TGCCAA--
 C A T G T A C G T G C A C A T G A T G C T G A C T G C A C T G A G A C T T C G A
A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:3
Score:0.74
Offset:0
Orientation:forward strand
Alignment:GGAGCCAATA
CGTGCCAAG-
 C A T G T A C G T G C A C A T G A T G C T G A C T G C A C T G A G A C T T C G A
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T

POL004.1_CCAAT-box/Jaspar

Match Rank:4
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-GGAGCCAATA-
ACTAGCCAATCA
 A C G T C A T G T A C G T G C A C A T G A T G C T G A C T G C A C T G A G A C T T C G A A C G T
G T C A A G T C G A C T C T G A C T A G A G T C A G T C C G T A C G T A C G A T T A G C T C G A

PB0112.1_E2F2_2/Jaspar

Match Rank:5
Score:0.73
Offset:-5
Orientation:forward strand
Alignment:-----GGAGCCAATA--
CCTTCGGCGCCAAAAGG
 A C G T A C G T A C G T A C G T A C G T C A T G T A C G T G C A C A T G A T G C T G A C T G C A C T G A G A C T T C G A A C G T A C G T
G A T C T A C G A G C T C G A T G A T C C T A G A T C G T G A C C A T G T A G C G A T C C T G A G T C A C T G A T C G A A C T G A T C G

PB0113.1_E2F3_2/Jaspar

Match Rank:6
Score:0.72
Offset:-5
Orientation:forward strand
Alignment:-----GGAGCCAATA--
AGCTCGGCGCCAAAAGC
 A C G T A C G T A C G T A C G T A C G T C A T G T A C G T G C A C A T G A T G C T G A C T G C A C T G A G A C T T C G A A C G T A C G T
G T A C A T C G G A C T C G A T G A T C C T A G A T C G G T A C C A T G T A G C G A T C C G T A G T C A C T G A T G C A A T C G A T G C

POL013.1_MED-1/Jaspar

Match Rank:7
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-GGAGCCAATA
CGGAGC-----
 A C G T C A T G T A C G T G C A C A T G A T G C T G A C T G C A C T G A G A C T T C G A
A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T

E2F1/MA0024.3/Jaspar

Match Rank:8
Score:0.70
Offset:-3
Orientation:forward strand
Alignment:---GGAGCCAATA
TTTGGCGCCAAA-
 A C G T A C G T A C G T C A T G T A C G T G C A C A T G A T G C T G A C T G C A C T G A G A C T T C G A
G C A T C G A T C G A T T A C G A T C G A G T C A T C G T A G C A G T C G T C A G C T A C G T A A C G T

NFYB/MA0502.1/Jaspar

Match Rank:9
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---GGAGCCAATA--
AAATGGACCAATCAG
 A C G T A C G T A C G T C A T G T A C G T G C A C A T G A T G C T G A C T G C A C T G A G A C T T C G A A C G T A C G T
T C G A G T C A G T C A A G C T A T C G T C A G C T G A A G T C A G T C C G T A C T G A A C G T T A G C T C G A T A C G

NFIA/MA0670.1/Jaspar

Match Rank:10
Score:0.67
Offset:0
Orientation:forward strand
Alignment:GGAGCCAATA
GGTGCCAAGT
 C A T G T A C G T G C A C A T G A T G C T G A C T G C A C T G A G A C T T C G A
T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T