Information for 18-GGCCTTGGAG (Motif 25)

A C T G A C T G A G T C A G T C A C G T A C G T C T A G A T C G C G T A A C T G
Reverse Opposite:
A G T C A C G T A T G C A G T C C G T A C G T A A C T G A C T G A G T C A G T C
p-value:1e-6
log p-value:-1.411e+01
Information Content per bp:1.950
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif0.96%
Number of Background Sequences with motif46.6
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets60.1 +/- 15.1bp
Average Position of motif in Background46.6 +/- 25.4bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:1
Score:0.76
Offset:-1
Orientation:reverse strand
Alignment:-GGCCTTGGAG
TGACCTTGAN-
 A C G T A C T G A C T G A G T C A G T C A C G T A C G T C T A G A T C G C G T A A C T G
G C A T C T A G C T G A T G A C G A T C A G C T C A G T A T C G C T G A T G C A A C G T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:2
Score:0.72
Offset:-3
Orientation:reverse strand
Alignment:---GGCCTTGGAG
BNTGDCCTTG---
 A C G T A C G T A C G T A C T G A C T G A G T C A G T C A C G T A C G T C T A G A T C G C G T A A C T G
A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G A C G T A C G T A C G T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:3
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-GGCCTTGGAG
TGACCTTGAV-
 A C G T A C T G A C T G A G T C A G T C A C G T A C G T C T A G A T C G C G T A A C T G
G C A T C T A G C T G A G A T C G T A C G A C T G A C T A T C G C T G A T G C A A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:4
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-GGCCTTGGAG
AGGCCTAG---
 A C G T A C T G A C T G A G T C A G T C A C G T A C G T C T A G A T C G C G T A A C T G
T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G A C G T A C G T A C G T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-GGCCTTGGAG
AGGCCTNG---
 A C G T A C T G A C T G A G T C A G T C A C G T A C G T C T A G A T C G C G T A A C T G
C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G A C G T A C G T A C G T

Nr5a2/MA0505.1/Jaspar

Match Rank:6
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---GGCCTTGGAG--
GCTGACCTTGAACTN
 A C G T A C G T A C G T A C T G A C T G A G T C A G T C A C G T A C G T C T A G A T C G C G T A A C T G A C G T A C G T
T A C G T G A C G C A T T C A G C T G A A G T C A G T C A G C T C A G T A T C G C T G A T C G A G A T C G A C T A G C T

PB0014.1_Esrra_1/Jaspar

Match Rank:7
Score:0.64
Offset:-6
Orientation:reverse strand
Alignment:------GGCCTTGGAG-
NNNNATGACCTTGANTN
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A G T C A G T C A C G T A C G T C T A G A T C G C G T A A C T G A C G T
C A G T G T A C T C A G A G T C C G T A A G C T T C A G G C T A G A T C G T A C A G C T G A C T A T C G T C G A G T C A C A G T G T C A

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--GGCCTTGGAG
CTGACCTTTG--
 A C G T A C G T A C T G A C T G A G T C A G T C A C G T A C G T C T A G A T C G C G T A A C T G
A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G A C G T A C G T

Zfx/MA0146.2/Jaspar

Match Rank:9
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--GGCCTTGGAG--
CAGGCCNNGGCCNN
 A C G T A C G T A C T G A C T G A G T C A G T C A C G T A C G T C T A G A T C G C G T A A C T G A C G T A C G T
A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--GGCCTTGGAG
NTGACCTTGA--
 A C G T A C G T A C T G A C T G A G T C A G T C A C G T A C G T C T A G A T C G C G T A A C T G
C A T G A G C T T A C G G T C A G T A C T A G C A G C T G A C T A T C G T C G A A C G T A C G T