p-value: | 1e-8 |
log p-value: | -1.873e+01 |
Information Content per bp: | 1.962 |
Number of Target Sequences with motif | 5.0 |
Percentage of Target Sequences with motif | 0.53% |
Number of Background Sequences with motif | 3.9 |
Percentage of Background Sequences with motif | 0.01% |
Average Position of motif in Targets | 45.2 +/- 20.2bp |
Average Position of motif in Background | 24.4 +/- 19.5bp |
Strand Bias (log2 ratio + to - strand density) | 0.6 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
SMAD3/MA0795.1/Jaspar
Match Rank: | 1 |
Score: | 0.67 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | CGGCTAGCCA CGTCTAGACA |
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Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer
Match Rank: | 2 |
Score: | 0.55 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | CGGCTAGCCA- ---BCAGACWA |
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NFIC/MA0161.1/Jaspar
Match Rank: | 3 |
Score: | 0.54 |
Offset: | 5 |
Orientation: | reverse strand |
Alignment: | CGGCTAGCCA- -----TGCCAA |
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POL010.1_DCE_S_III/Jaspar
Match Rank: | 4 |
Score: | 0.54 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | CGGCTAGCCA -NGCTN---- |
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NFIX/MA0671.1/Jaspar
Match Rank: | 5 |
Score: | 0.54 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | CGGCTAGCCA-- ---CGTGCCAAG |
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PB0056.1_Rfxdc2_1/Jaspar
Match Rank: | 6 |
Score: | 0.52 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -CGGCTAGCCA---- CCGCATAGCAACGGA |
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POL004.1_CCAAT-box/Jaspar
Match Rank: | 7 |
Score: | 0.52 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | CGGCTAGCCA---- --ACTAGCCAATCA |
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Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer
Match Rank: | 8 |
Score: | 0.51 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---CGGCTAGCCA- TGGCAGNCTGCCAG |
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PB0155.1_Osr2_2/Jaspar
Match Rank: | 9 |
Score: | 0.50 |
Offset: | -4 |
Orientation: | reverse strand |
Alignment: | ----CGGCTAGCCA-- NNTGTAGGTAGCANNT |
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POL006.1_BREu/Jaspar
Match Rank: | 10 |
Score: | 0.49 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | CGGCTAGCCA -GGCGCGCT- |
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