Information for 7-GCGCACTACA (Motif 12)

A C T G A G T C C A T G A T G C G T C A A T G C C G A T G C T A A T G C C G T A
Reverse Opposite:
A C G T A T C G C G A T C G T A A T C G A C G T A T C G G A T C A C T G G T A C
p-value:1e-10
log p-value:-2.525e+01
Information Content per bp:1.844
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.18%
Number of Background Sequences with motif25.7
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets54.2 +/- 26.4bp
Average Position of motif in Background63.6 +/- 32.4bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0091.1_Zbtb3_1/Jaspar

Match Rank:1
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--GCGCACTACA-----
AATCGCACTGCATTCCG
 A C G T A C G T A C T G A G T C C A T G A T G C G T C A A T G C C G A T G C T A A T G C C G T A A C G T A C G T A C G T A C G T A C G T
C T G A C T G A A C G T A T G C A T C G G T A C C T G A A T G C C G A T A C T G A T G C G T C A A G C T A C G T A T G C A T G C A C T G

PB0208.1_Zscan4_2/Jaspar

Match Rank:2
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----GCGCACTACA--
CGAAGCACACAAAATA
 A C G T A C G T A C G T A C G T A C T G A G T C C A T G A T G C G T C A A T G C C G A T G C T A A T G C C G T A A C G T A C G T
G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:3
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:GCGCACTACA-
-NSCACTYVAV
 A C T G A G T C C A T G A T G C G T C A A T G C C G A T G C T A A T G C C G T A A C G T
A C G T C T A G T A G C A G T C G C T A G A T C A C G T G A T C T C G A C T G A T A C G

NKX2-8/MA0673.1/Jaspar

Match Rank:4
Score:0.62
Offset:2
Orientation:forward strand
Alignment:GCGCACTACA-
--CCACTTGAA
 A C T G A G T C C A T G A T G C G T C A A T G C C G A T G C T A A T G C C G T A A C G T
A C G T A C G T T A G C G A T C G T C A G A T C A G C T G A C T T A C G G C T A T C G A

PB0199.1_Zfp161_2/Jaspar

Match Rank:5
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---GCGCACTACA-
GCCGCGCAGTGCGT
 A C G T A C G T A C G T A C T G A G T C C A T G A T G C G T C A A T G C C G A T G C T A A T G C C G T A A C G T
C A T G G A T C A G T C T A C G G A T C C T A G T G A C G T C A C T A G A C G T C T A G G T A C T C A G A G C T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:6
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GCGCACTACA
AASCACTCAA
 A C T G A G T C C A T G A T G C G T C A A T G C C G A T G C T A A T G C C G T A
C T G A C T G A T A G C G A T C G C T A G T A C A C G T G A T C T G C A C G T A

PB0099.1_Zfp691_1/Jaspar

Match Rank:7
Score:0.57
Offset:-5
Orientation:reverse strand
Alignment:-----GCGCACTACA--
NNNNTGAGCACTGTNNG
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C C A T G A T G C G T C A A T G C C G A T G C T A A T G C C G T A A C G T A C G T
G C T A G A C T C G T A T C A G A C G T A C T G C T G A A C T G A G T C C G T A G T A C A G C T C A T G A G C T C A G T G T A C T C A G

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:8
Score:0.57
Offset:1
Orientation:forward strand
Alignment:GCGCACTACA-
-RSCACTYRAG
 A C T G A G T C C A T G A T G C G T C A A T G C C G A T G C T A A T G C C G T A A C G T
A C G T C T A G T A C G A G T C C G T A A G T C A C G T A G T C T C G A C G T A T A C G

PB0044.1_Mtf1_1/Jaspar

Match Rank:9
Score:0.57
Offset:-5
Orientation:reverse strand
Alignment:-----GCGCACTACA-
NNTTTGCACACGGCCC
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C C A T G A T G C G T C A A T G C C G A T G C T A A T G C C G T A A C G T
C G A T G A C T C A G T A C G T G A C T A C T G G A T C C T G A A G T C G C T A G A T C A C T G C T A G G A T C T A G C G T A C

NKX2-3/MA0672.1/Jaspar

Match Rank:10
Score:0.56
Offset:1
Orientation:forward strand
Alignment:GCGCACTACA-
-ACCACTTGAA
 A C T G A G T C C A T G A T G C G T C A A T G C C G A T G C T A A T G C C G T A A C G T
A C G T T G C A T A G C G A T C G C T A G T A C A C G T A G C T T C A G C G T A T C G A