Information for 7-CGATTGGCTACCA (Motif 7)

A G T C A C T G C G T A A C G T A C G T A C T G A C T G A G T C A C G T C T G A A G T C G T A C C T G A
Reverse Opposite:
A G C T A C T G A C T G A G C T C G T A A C T G A G T C A G T C C G T A C G T A A C G T A G T C A C T G
p-value:1e-12
log p-value:-2.974e+01
Information Content per bp:1.941
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.63%
Number of Background Sequences with motif0.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets52.8 +/- 28.7bp
Average Position of motif in Background57.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFY(CCAAT)/Promoter/Homer

Match Rank:1
Score:0.74
Offset:-1
Orientation:reverse strand
Alignment:-CGATTGGCTACCA
CCGATTGGCT----
 A C G T A G T C A C T G C G T A A C G T A C G T A C T G A C T G A G T C A C G T C T G A A G T C G T A C C T G A
A T G C A G T C A T C G C G T A A C G T A C G T A C T G A C T G G A T C A G C T A C G T A C G T A C G T A C G T

POL004.1_CCAAT-box/Jaspar

Match Rank:2
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:CGATTGGCTACCA
TGATTGGCTANN-
 A G T C A C T G C G T A A C G T A C G T A C T G A C T G A G T C A C G T C T G A A G T C G T A C C T G A
A G C T A T C G G C T A G C A T A C G T C T A G T A C G G A T C G A C T C T G A T C A G C A G T A C G T

NFYB/MA0502.1/Jaspar

Match Rank:3
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-CGATTGGCTACCA-
CTGATTGGTCNATTT
 A C G T A G T C A C T G C G T A A C G T A C G T A C T G A C T G A G T C A C G T C T G A A G T C G T A C C T G A A C G T
A T G C A G C T A T C G C G T A A G C T A C G T A C T G A C T G G A C T A G T C T A G C T C G A C A G T C A G T A G C T

NFIC/MA0161.1/Jaspar

Match Rank:4
Score:0.61
Offset:3
Orientation:forward strand
Alignment:CGATTGGCTACCA
---TTGGCA----
 A G T C A C T G C G T A A C G T A C G T A C T G A C T G A G T C A C G T C T G A A G T C G T A C C T G A
A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T A C G T A C G T

PB0154.1_Osr1_2/Jaspar

Match Rank:5
Score:0.61
Offset:2
Orientation:forward strand
Alignment:CGATTGGCTACCA-----
--ACATGCTACCTAATAC
 A G T C A C T G C G T A A C G T A C G T A C T G A C T G A G T C A C G T C T G A A G T C G T A C C T G A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C T G A G A T C G C T A G A C T T C A G G A T C A G C T C G T A G T A C G A T C G C A T T C G A G T C A C G A T G T C A T G A C

PB0155.1_Osr2_2/Jaspar

Match Rank:6
Score:0.59
Offset:2
Orientation:forward strand
Alignment:CGATTGGCTACCA-----
--ACTTGCTACCTACACC
 A G T C A C T G C G T A A C G T A C G T A C T G A C T G A G T C A C G T C T G A A G T C G T A C C T G A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C T G A G A T C G A C T G A C T T A C G A G T C G A C T G C T A G T A C G A T C G C A T T C G A G T A C C G T A A G C T T G A C

NFIX/MA0671.1/Jaspar

Match Rank:7
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:CGATTGGCTACCA
--NTTGGCANN--
 A G T C A C T G C G T A A C G T A C G T A C T G A C T G A G T C A C G T C T G A A G T C G T A C C T G A
A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:8
Score:0.57
Offset:3
Orientation:forward strand
Alignment:CGATTGGCTACCA
---TWGTCTGV--
 A G T C A C T G C G T A A C G T A C G T A C T G A C T G A G T C A C G T C T G A A G T C G T A C C T G A
A C G T A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T

PB0158.1_Rfx3_2/Jaspar

Match Rank:9
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----CGATTGGCTACCA-----
ACTGACCCTTGGTTACCACAAAG
 A C G T A C G T A C G T A C G T A C G T A G T C A C T G C G T A A C G T A C G T A C T G A C T G A G T C A C G T C T G A A G T C G T A C C T G A A C G T A C G T A C G T A C G T A C G T
T G C A A G T C A C G T A T C G G C T A A T G C T A C G A T G C G C A T C G A T T C A G A C T G C G A T C A G T C G T A G A T C T G A C T C G A T G A C T C G A T C G A C G T A A T C G

Dux/MA0611.1/Jaspar

Match Rank:10
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-CGATTGGCTACCA
TTGATTGN------
 A C G T A G T C A C T G C G T A A C G T A C G T A C T G A C T G A G T C A C G T C T G A A G T C G T A C C T G A
G A C T A C G T A C T G C G T A A C G T A C G T C T A G A T C G A C G T A C G T A C G T A C G T A C G T A C G T