Information for 4-AAGGCGGGGT (Motif 6)

T G C A T C G A T C A G A C T G A T G C T A C G C A T G C T A G A C T G G C A T
Reverse Opposite:
C G T A T G A C G A T C G T A C A T G C T A C G T G A C A G T C A G C T A C G T
p-value:1e-12
log p-value:-2.983e+01
Information Content per bp:1.652
Number of Target Sequences with motif102.0
Percentage of Target Sequences with motif10.73%
Number of Background Sequences with motif2166.7
Percentage of Background Sequences with motif4.82%
Average Position of motif in Targets45.9 +/- 26.4bp
Average Position of motif in Background50.1 +/- 31.8bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0039.1_Klf7_1/Jaspar

Match Rank:1
Score:0.74
Offset:-3
Orientation:reverse strand
Alignment:---AAGGCGGGGT---
NNAGGGGCGGGGTNNA
 A C G T A C G T A C G T T G C A T C G A T C A G A C T G A T G C T A C G C A T G C T A G A C T G G C A T A C G T A C G T A C G T
G C T A C G A T C T G A C T A G C T A G A C T G A C T G G A T C C A T G A C T G C A T G C A T G A G C T G A T C T C A G C G T A

PB0180.1_Sp4_2/Jaspar

Match Rank:2
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--AAGGCGGGGT---
CAAAGGCGTGGCCAG
 A C G T A C G T T G C A T C G A T C A G A C T G A T G C T A C G C A T G C T A G A C T G G C A T A C G T A C G T A C G T
A G T C C G T A C G T A T C G A A T C G A C T G G T A C A C T G A C G T C T A G A C T G G A T C G A T C G T C A C A T G

POL006.1_BREu/Jaspar

Match Rank:3
Score:0.71
Offset:2
Orientation:reverse strand
Alignment:AAGGCGGGGT
--GGCGCGCT
 T G C A T C G A T C A G A C T G A T G C T A C G C A T G C T A G A C T G G C A T
A C G T A C G T C T A G T A C G A G T C A C T G A G T C A T C G A T G C A C G T

PB0164.1_Smad3_2/Jaspar

Match Rank:4
Score:0.69
Offset:-4
Orientation:reverse strand
Alignment:----AAGGCGGGGT---
NAGANTGGCGGGGNGNA
 A C G T A C G T A C G T A C G T T G C A T C G A T C A G A C T G A T G C T A C G C A T G C T A G A C T G G C A T A C G T A C G T A C G T
T G A C C T G A T C A G C T G A C A T G A C G T C A T G T C A G A T G C T A C G A T C G T C A G C T A G T A G C C A T G C A G T G T C A

POL003.1_GC-box/Jaspar

Match Rank:5
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--AAGGCGGGGT--
AGGGGGCGGGGCTG
 A C G T A C G T T G C A T C G A T C A G A C T G A T G C T A C G C A T G C T A G A C T G G C A T A C G T A C G T
C G T A C T A G C A T G T C A G A C T G C T A G G T A C C T A G A C T G C T A G C A T G A G T C A G C T C A T G

PB0107.1_Ascl2_2/Jaspar

Match Rank:6
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---AAGGCGGGGT---
NATNGGGNGGGGANAN
 A C G T A C G T A C G T T G C A T C G A T C A G A C T G A T G C T A C G C A T G C T A G A C T G G C A T A C G T A C G T A C G T
C T G A T G C A G A C T T C G A C T A G C T A G T C A G G A T C A C T G C A T G A T C G C A T G G C T A A C G T C T G A T A C G

SP2/MA0516.1/Jaspar

Match Rank:7
Score:0.66
Offset:-5
Orientation:reverse strand
Alignment:-----AAGGCGGGGT
GGGNGGGGGCGGGGC
 A C G T A C G T A C G T A C G T A C G T T G C A T C G A T C A G A C T G A T G C T A C G C A T G C T A G A C T G G C A T
T A C G T A C G T A C G T C G A C T A G C T A G C T A G C T A G A C T G G T A C C T A G A T C G C T A G T C A G T A G C

KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer

Match Rank:8
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---AAGGCGGGGT--
NNVDGGGYGGGGCYN
 A C G T A C G T A C G T T G C A T C G A T C A G A C T G A T G C T A C G C A T G C T A G A C T G G C A T A C G T A C G T
T A C G T G A C T C A G C T G A A C T G A C T G A C T G A G C T A C T G A C T G C T A G A C T G A G T C A G T C C T G A

SP1/MA0079.3/Jaspar

Match Rank:9
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-AAGGCGGGGT
GGGGGCGGGGC
 A C G T T G C A T C G A T C A G A C T G A T G C T A C G C A T G C T A G A C T G G C A T
T C A G C T A G C T A G A C T G A C T G G T A C C T A G A C T G C T A G T C A G T G A C

Klf12/MA0742.1/Jaspar

Match Rank:10
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----AAGGCGGGGT-
NANAAGGGCGTGGTC
 A C G T A C G T A C G T A C G T T G C A T C G A T C A G A C T G A T G C T A C G C A T G C T A G A C T G G C A T A C G T
C G T A C G T A C G A T C G T A C G T A C T A G T C A G C T A G G A T C C A T G A C G T A T C G C A T G A G C T G T A C