Information for 21-GCAAATATTT (Motif 29)

A T C G A T G C G T C A G T C A G T C A A G C T T G C A A C G T A C G T C G A T
Reverse Opposite:
G C T A C G T A G T C A A C G T T C G A A C G T A C G T A C G T T A C G A T G C
p-value:1e-4
log p-value:-1.093e+01
Information Content per bp:1.736
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.26%
Number of Background Sequences with motif123.2
Percentage of Background Sequences with motif0.27%
Average Position of motif in Targets56.4 +/- 29.8bp
Average Position of motif in Background52.3 +/- 35.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arid5a/MA0602.1/Jaspar

Match Rank:1
Score:0.70
Offset:1
Orientation:forward strand
Alignment:GCAAATATTT-----
-CTAATATTGCTAAA
 A T C G A T G C G T C A G T C A G T C A A G C T T G C A A C G T A C G T C G A T A C G T A C G T A C G T A C G T A C G T
A C G T T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A

PB0002.1_Arid5a_1/Jaspar

Match Rank:2
Score:0.70
Offset:1
Orientation:forward strand
Alignment:GCAAATATTT-----
-CTAATATTGCTAAA
 A T C G A T G C G T C A G T C A G T C A A G C T T G C A A C G T A C G T C G A T A C G T A C G T A C G T A C G T A C G T
A C G T T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A

FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer

Match Rank:3
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---GCAAATATTT
WAAGTAAAYA---
 A C G T A C G T A C G T A T C G A T G C G T C A G T C A G T C A A G C T T G C A A C G T A C G T C G A T
G C A T T C G A C T G A T C A G A G C T G T C A G T C A C T G A A G T C T G C A A C G T A C G T A C G T

FOXC1/MA0032.2/Jaspar

Match Rank:4
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---GCAAATATTT
TATGTAAATAT--
 A C G T A C G T A C G T A T C G A T G C G T C A G T C A G T C A A G C T T G C A A C G T A C G T C G A T
G C A T C T G A C G A T T C A G G C A T G T C A G T C A C T G A A G C T C T G A G C A T A C G T A C G T

MF0010.1_Homeobox_class/Jaspar

Match Rank:5
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:GCAAATATTT
--AATTATT-
 A T C G A T G C G T C A G T C A G T C A A G C T T G C A A C G T A C G T C G A T
A C G T A C G T G C T A G C T A G A C T G A C T C G T A G C A T C G A T A C G T

FOXB1/MA0845.1/Jaspar

Match Rank:6
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---GCAAATATTT
TATGTAAATAT--
 A C G T A C G T A C G T A T C G A T G C G T C A G T C A G T C A A G C T T G C A A C G T A C G T C G A T
G C A T C T G A C G A T C T A G G A C T T G C A G C T A C G T A A G C T C T G A G C A T A C G T A C G T

FOXD2/MA0847.1/Jaspar

Match Rank:7
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GCAAATATTT
GTAAACA---
 A T C G A T G C G T C A G T C A G T C A A G C T T G C A A C G T A C G T C G A T
T C A G G A C T G T C A G T C A C G T A A G T C C T G A A C G T A C G T A C G T

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:8
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----GCAAATATTT
ATATGCAAAT----
 A C G T A C G T A C G T A C G T A T C G A T G C G T C A G T C A G T C A A G C T T G C A A C G T A C G T C G A T
G T C A G C A T G C T A C A G T C T A G G A T C C G T A C T G A C G T A C G A T A C G T A C G T A C G T A C G T

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:9
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----GCAAATATTT
NACAGGAAAT----
 A C G T A C G T A C G T A C G T A T C G A T G C G T C A G T C A G T C A A G C T T G C A A C G T A C G T C G A T
T A G C C T G A T A G C G T C A A C T G A C T G C G T A C G T A C T G A A G C T A C G T A C G T A C G T A C G T

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----GCAAATATTT
TTATGCAAAT----
 A C G T A C G T A C G T A C G T A T C G A T G C G T C A G T C A G T C A A G C T T G C A A C G T A C G T C G A T
C G A T G C A T C T G A A C G T A C T G A G T C C G T A C T G A C G T A C G A T A C G T A C G T A C G T A C G T