Information for 20-CGGGCTCGCA (Motif 28)

A G T C A C T G A C T G A C T G A G T C A C G T A G T C A C T G A G T C C G T A
Reverse Opposite:
A C G T A C T G A G T C A C T G C G T A A C T G A G T C A G T C A G T C A C T G
p-value:1e-5
log p-value:-1.184e+01
Information Content per bp:1.530
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.63%
Number of Background Sequences with motif21.0
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets71.5 +/- 12.3bp
Average Position of motif in Background53.0 +/- 43.5bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---CGGGCTCGCA
GCTCGGSCTC---
 A C G T A C G T A C G T A G T C A C T G A C T G A C T G A G T C A C G T A G T C A C T G A G T C C G T A
C T A G G T A C A C G T A T G C C T A G A C T G T A C G A G T C A C G T A G T C A C G T A C G T A C G T

PB0029.1_Hic1_1/Jaspar

Match Rank:2
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--CGGGCTCGCA----
NGTAGGTTGGCATNNN
 A C G T A C G T A G T C A C T G A C T G A C T G A G T C A C G T A G T C A C T G A G T C C G T A A C G T A C G T A C G T A C G T
C T A G C T A G A G C T C G T A T C A G T C A G A C G T C A G T A C T G A T C G A G T C C G T A G A C T T G C A T C A G G C A T

POL006.1_BREu/Jaspar

Match Rank:3
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:CGGGCTCGCA
--GGCGCGCT
 A G T C A C T G A C T G A C T G A G T C A C G T A G T C A C T G A G T C C G T A
A C G T A C G T C T A G T A C G A G T C A C T G A G T C A T C G A T G C A C G T

EGR3/MA0732.1/Jaspar

Match Rank:4
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---CGGGCTCGCA--
CTACGCCCACGCACT
 A C G T A C G T A C G T A G T C A C T G A C T G A C T G A G T C A C G T A G T C A C T G A G T C C G T A A C G T A C G T
G A T C G A C T G T C A G A T C C T A G A T G C A G T C A G T C T G C A A T G C T C A G G A T C C T G A G A T C G C A T

POL010.1_DCE_S_III/Jaspar

Match Rank:5
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:CGGGCTCGCA
--NGCTN---
 A G T C A C T G A C T G A C T G A G T C A C G T A G T C A C T G A G T C C G T A
A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:6
Score:0.57
Offset:1
Orientation:forward strand
Alignment:CGGGCTCGCA-
-TBGCACGCAA
 A G T C A C T G A C T G A C T G A G T C A C G T A G T C A C T G A G T C C G T A A C G T
A C G T G C A T A T C G C A T G G T A C G C T A A G T C T C A G T G A C G T C A T G C A

PB0009.1_E2F3_1/Jaspar

Match Rank:7
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---CGGGCTCGCA--
ATAAGGGCGCGCGAT
 A C G T A C G T A C G T A G T C A C T G A C T G A C T G A G T C A C G T A G T C A C T G A G T C C G T A A C G T A C G T
T C G A G C A T C G T A G C T A C T A G T A C G T A C G T A G C A T C G A T G C A T C G G A T C A T C G G C T A G C A T

Hic1/MA0739.1/Jaspar

Match Rank:8
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:CGGGCTCGCA-
--GGTTGGCAT
 A G T C A C T G A C T G A C T G A G T C A C G T A G T C A C T G A G T C C G T A A C G T
A C G T A C G T T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:9
Score:0.56
Offset:0
Orientation:forward strand
Alignment:CGGGCTCGCA---
CTGTCTGTCACCT
 A G T C A C T G A C T G A C T G A G T C A C G T A G T C A C T G A G T C C G T A A C G T A C G T A C G T
T A G C G C A T T C A G A C G T A G T C A C G T T A C G C A G T A T G C G C T A T A G C G A T C G A C T

PB0008.1_E2F2_1/Jaspar

Match Rank:10
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---CGGGCTCGCA--
ATAAAGGCGCGCGAT
 A C G T A C G T A C G T A G T C A C T G A C T G A C T G A G T C A C G T A G T C A C T G A G T C C G T A A C G T A C G T
C T G A G C A T C G T A G C T A C T G A T A C G A T C G T G A C A T C G A T G C A T C G G A T C T A C G G C T A G C A T