Information for 19-CGAGRACTTG (Motif 27)

G T A C A C T G C G T A A C T G C T A G C T G A A G T C A C G T A C G T A C T G
Reverse Opposite:
A G T C C G T A C G T A A C T G A G C T A G T C A G T C A C G T G T A C A C T G
p-value:1e-5
log p-value:-1.240e+01
Information Content per bp:1.889
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.63%
Number of Background Sequences with motif19.1
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets72.0 +/- 23.3bp
Average Position of motif in Background44.9 +/- 28.5bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----CGAGRACTTG-
NGNTCTAGAACCNGV
 A C G T A C G T A C G T A C G T G T A C A C T G C G T A A C T G C T A G C T G A A G T C A C G T A C G T A C T G A C G T
C T G A T C A G G C T A A G C T A G T C G A C T C T G A C T A G T G C A C T G A A G T C G T A C G A T C A C T G T C G A

PB0152.1_Nkx3-1_2/Jaspar

Match Rank:2
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---CGAGRACTTG----
TTCNAAGTACTTNNNNN
 A C G T A C G T A C G T G T A C A C T G C G T A A C T G C T A G C T G A A G T C A C G T A C G T A C T G A C G T A C G T A C G T A C G T
C A G T A C G T A G T C T G A C C T G A C T G A C A T G A G C T T C G A G T A C G A C T G A C T A T C G T A C G G C T A C A T G A G C T

PB0090.1_Zbtb12_1/Jaspar

Match Rank:3
Score:0.63
Offset:-5
Orientation:reverse strand
Alignment:-----CGAGRACTTG--
NNGATCTAGAACCTNNN
 A C G T A C G T A C G T A C G T A C G T G T A C A C T G C G T A A C T G C T A G C T G A A G T C A C G T A C G T A C T G A C G T A C G T
T C A G A C G T C T A G C G T A A G C T A G T C A C G T C T G A A C T G G C T A C G T A A G T C T G A C A G C T C G A T G T C A T A C G

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:4
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:CGAGRACTTG
BNTGDCCTTG
 G T A C A C T G C G T A A C T G C T A G C T G A A G T C A C G T A C G T A C T G
A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:5
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:CGAGRACTTG--
--TGACCTTGAN
 G T A C A C T G C G T A A C T G C T A G C T G A A G T C A C G T A C G T A C T G A C G T A C G T
A C G T A C G T G C A T C T A G C T G A T G A C G A T C A G C T C A G T A T C G C T G A T G C A

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CGAGRACTTG
CNAGGCCT--
 G T A C A C T G C G T A A C T G C T A G C T G A A G T C A C G T A C G T A C T G
A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T A C G T A C G T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:7
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:CGAGRACTTG--
--TGACCTTGAV
 G T A C A C T G C G T A A C T G C T A G C T G A A G T C A C G T A C G T A C T G A C G T A C G T
A C G T A C G T G C A T C T A G C T G A G A T C G T A C G A C T G A C T A T C G C T G A T G C A

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:8
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CGAGRACTTG
CTAGGCCT--
 G T A C A C T G C G T A A C T G C T A G C T G A A G T C A C G T A C G T A C T G
T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T A C G T A C G T

NKX2-3/MA0672.1/Jaspar

Match Rank:9
Score:0.58
Offset:2
Orientation:forward strand
Alignment:CGAGRACTTG--
--ACCACTTGAA
 G T A C A C T G C G T A A C T G C T A G C T G A A G T C A C G T A C G T A C T G A C G T A C G T
A C G T A C G T T G C A T A G C G A T C G C T A G T A C A C G T A G C T T C A G C G T A T C G A

NKX2-8/MA0673.1/Jaspar

Match Rank:10
Score:0.57
Offset:3
Orientation:forward strand
Alignment:CGAGRACTTG--
---CCACTTGAA
 G T A C A C T G C G T A A C T G C T A G C T G A A G T C A C G T A C G T A C T G A C G T A C G T
A C G T A C G T A C G T T A G C G A T C G T C A G A T C A G C T G A C T T A C G G C T A T C G A