Information for 17-CCGCCGCCCAATC (Motif 20)

G T A C A G T C A C T G A T G C A G T C A C T G T G A C A G T C A G T C C G T A C G T A A C G T A G T C
Reverse Opposite:
A C T G C G T A A C G T A C G T A C T G A C T G A C T G A G T C A C T G A T C G A G T C C T A G A C T G
p-value:1e-8
log p-value:-1.908e+01
Information Content per bp:1.931
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.63%
Number of Background Sequences with motif6.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets42.7 +/- 11.5bp
Average Position of motif in Background35.0 +/- 36.4bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFY(CCAAT)/Promoter/Homer

Match Rank:1
Score:0.62
Offset:5
Orientation:forward strand
Alignment:CCGCCGCCCAATC--
-----AGCCAATCGG
 G T A C A G T C A C T G A T G C A G T C A C T G T G A C A G T C A G T C C G T A C G T A A C G T A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A C T A G A G T C A G T C C G T A C G T A A C G T T A G C T C A G T A C G

NFYB/MA0502.1/Jaspar

Match Rank:2
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CCGCCGCCCAATC--
AAATGGACCAATCAG
 G T A C A G T C A C T G A T G C A G T C A C T G T G A C A G T C A G T C C G T A C G T A A C G T A G T C A C G T A C G T
T C G A G T C A G T C A A G C T A T C G T C A G C T G A A G T C A G T C C G T A C T G A A C G T T A G C T C G A T A C G

EGR1/MA0162.2/Jaspar

Match Rank:3
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CCGCCGCCCAATC-
CCCCCGCCCCCGCC
 G T A C A G T C A C T G A T G C A G T C A C T G T G A C A G T C A G T C C G T A C G T A A C G T A G T C A C G T
A T G C G A T C A G T C G T A C G A T C C T A G A G T C A G T C A G T C G T A C A G T C C A T G A T G C T G A C

PB0179.1_Sp100_2/Jaspar

Match Rank:4
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CCGCCGCCCAATC-
TCCGTCGCTTAAAAG
 A C G T G T A C A G T C A C T G A T G C A G T C A C T G T G A C A G T C A G T C C G T A C G T A A C G T A G T C A C G T
A G C T A T G C G A T C T C A G G C A T T G A C A C T G G A T C A C G T C A G T G C T A C G T A G C T A C G T A A C T G

Dux/MA0611.1/Jaspar

Match Rank:5
Score:0.59
Offset:7
Orientation:forward strand
Alignment:CCGCCGCCCAATC--
-------CCAATCAA
 G T A C A G T C A C T G A T G C A G T C A C T G T G A C A G T C A G T C C G T A C G T A A C G T A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C C G T A C G T A A C G T A G T C C G T A C G T A

Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:6
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:CCGCCGCCCAATC-
--YCCGCCCACGCN
 G T A C A G T C A C T G A T G C A G T C A C T G T G A C A G T C A G T C C G T A C G T A A C G T A G T C A C G T
A C G T A C G T G A T C G T A C G A T C C T A G A G T C A G T C A G T C G T C A A G T C C T A G A T G C T C G A

NFYA/MA0060.2/Jaspar

Match Rank:7
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:CCGCCGCCCAATC--------
---TGGACCAATCAGCACTCT
 G T A C A G T C A C T G A T G C A G T C A C T G T G A C A G T C A G T C C G T A C G T A A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A G C T A T C G T C A G C T G A A T G C A G T C C G T A T C G A G A C T T A G C T C G A T C A G T G A C C T G A A T G C A C G T G T A C C G A T

POL004.1_CCAAT-box/Jaspar

Match Rank:8
Score:0.57
Offset:2
Orientation:forward strand
Alignment:CCGCCGCCCAATC-
--ACTAGCCAATCA
 G T A C A G T C A C T G A T G C A G T C A C T G T G A C A G T C A G T C C G T A C G T A A C G T A G T C A C G T
A C G T A C G T G T C A A G T C G A C T C T G A C T A G A G T C A G T C C G T A C G T A C G A T T A G C T C G A

PH0026.1_Duxbl/Jaspar

Match Rank:9
Score:0.57
Offset:3
Orientation:forward strand
Alignment:CCGCCGCCCAATC-------
---CGACCCAATCAACGGTG
 G T A C A G T C A C T G A T G C A G T C A C T G T G A C A G T C A G T C C G T A C G T A A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A G T C C T A G C T G A A G T C A G T C A G T C G T C A G T C A A G C T A G T C C G T A C T G A A G T C T A C G T C A G G C A T T A C G

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:10
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:CCGCCGCCCAATC
GCTCCGCCCMCY-
 G T A C A G T C A C T G A T G C A G T C A C T G T G A C A G T C A G T C C G T A C G T A A C G T A G T C
C T A G A G T C G A C T G T A C A T G C C T A G A G T C A G T C A G T C G T C A A G T C G A C T A C G T