Information for 12-GTGGAAAGTAGAGGGC (Motif 19)

A C T G A C G T A C T G A C T G C T G A G T C A C T G A A T C G A G C T C G T A A C T G C G T A A C T G A C T G A C T G A G T C
Reverse Opposite:
A C T G A G T C A G T C A G T C A C G T G T A C A C G T C T G A A T G C A G C T A C G T A G C T A G T C A G T C C G T A A G T C
p-value:1e-8
log p-value:-2.064e+01
Information Content per bp:1.884
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.53%
Number of Background Sequences with motif2.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets63.0 +/- 21.4bp
Average Position of motif in Background66.1 +/- 8.3bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:1
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:GTGGAAAGTAGAGGGC-----
-TGGCCACCAGGTGGCACTNT
 A C T G A C G T A C T G A C T G C T G A G T C A C T G A A T C G A G C T C G T A A C T G C G T A A C T G A C T G A C T G A G T C A C G T A C G T A C G T A C G T A C G T
A C G T G A C T C A T G C T A G G T A C G A T C C G T A T A G C G A T C C T G A A C T G T C A G C A G T C T A G C A T G G A T C C T G A T A G C G A C T T C G A A C G T

CTCF/MA0139.1/Jaspar

Match Rank:2
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GTGGAAAGTAGAGGGC----
-TGGCCACCAGGGGGCGCTA
 A C T G A C G T A C T G A C T G C T G A G T C A C T G A A T C G A G C T C G T A A C T G C G T A A C T G A C T G A C T G A G T C A C G T A C G T A C G T A C G T
A C G T G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:3
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GTGGAAAGTAGAGGGC
AATGGAAAAT-------
 A C G T A C T G A C G T A C T G A C T G C T G A G T C A C T G A A T C G A G C T C G T A A C T G C G T A A C T G A C T G A C T G A G T C
T C G A T C G A A G C T A C T G A C T G C G T A C G T A G T C A T G C A G C A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:GTGGAAAGTAGAGGGC-------
---GCCASCAGGGGGCGCYVNNG
 A C T G A C G T A C T G A C T G C T G A G T C A C T G A A T C G A G C T C G T A A C T G C G T A A C T G A C T G A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

ZNF354C/MA0130.1/Jaspar

Match Rank:5
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:GTGGAAAGTAGAGGGC
GTGGAT----------
 A C T G A C G T A C T G A C T G C T G A G T C A C T G A A T C G A G C T C G T A A C T G C G T A A C T G A C T G A C T G A G T C
A T C G A C G T A C T G A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFATC1/MA0624.1/Jaspar

Match Rank:6
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-GTGGAAAGTAGAGGGC
NNTGGAAANN-------
 A C G T A C T G A C G T A C T G A C T G C T G A G T C A C T G A A T C G A G C T C G T A A C T G C G T A A C T G A C T G A C T G A G T C
C G T A C T G A G A C T C T A G A C T G C T G A C T G A G C T A C G T A G C A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFATC3/MA0625.1/Jaspar

Match Rank:7
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-GTGGAAAGTAGAGGGC
AATGGAAAAT-------
 A C G T A C T G A C G T A C T G A C T G C T G A G T C A C T G A A T C G A G C T C G T A A C T G C G T A A C T G A C T G A C T G A G T C
C G T A C T G A G A C T T A C G C A T G T C G A C G T A G C T A C T G A G C A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFAT5/MA0606.1/Jaspar

Match Rank:8
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-GTGGAAAGTAGAGGGC
NATGGAAAAN-------
 A C G T A C T G A C G T A C T G A C T G C T G A G T C A C T G A A T C G A G C T C G T A A C T G C G T A A C T G A C T G A C T G A G T C
G C T A C T G A C G A T T C A G C T A G C G T A C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

THRa(NR)/C17.2-THRa-ChIP-Seq(GSE38347)/Homer

Match Rank:9
Score:0.51
Offset:2
Orientation:forward strand
Alignment:GTGGAAAGTAGAGGGC-
--GGTCANYTGAGGWCA
 A C T G A C G T A C T G A C T G C T G A G T C A C T G A A T C G A G C T C G T A A C T G C G T A A C T G A C T G A C T G A G T C A C G T
A C G T A C G T C T A G C A T G A C G T A G T C G C T A A G C T A G T C A G C T T C A G C T G A A C T G C A T G G C A T A T G C C G T A

LXRE(NR),DR4/RAW-LXRb.biotin-ChIP-Seq(GSE21512)/Homer

Match Rank:10
Score:0.50
Offset:1
Orientation:forward strand
Alignment:GTGGAAAGTAGAGGGC-
-GGGTTACTANAGGTCA
 A C T G A C G T A C T G A C T G C T G A G T C A C T G A A T C G A G C T C G T A A C T G C G T A A C T G A C T G A C T G A G T C A C G T
A C G T C T A G C A T G C A T G A G C T G A C T C G T A G A T C A G C T G T C A A T G C T C G A C T A G C A T G A C G T A G T C C T G A