Information for 9-TTTTAAGGGC (Motif 14)

A C G T A G C T G C A T A C G T C G T A C G T A A C T G C A T G A T C G A T G C
Reverse Opposite:
A T C G A T G C G T A C G T A C A C G T C G A T G T C A C G T A C T G A C G T A
p-value:1e-10
log p-value:-2.423e+01
Information Content per bp:1.843
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.47%
Number of Background Sequences with motif55.3
Percentage of Background Sequences with motif0.12%
Average Position of motif in Targets54.9 +/- 28.9bp
Average Position of motif in Background55.0 +/- 39.4bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TATA-Box(TBP)/Promoter/Homer

Match Rank:1
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--TTTTAAGGGC
CCTTTTATAGNC
 A C G T A C G T A C G T A G C T G C A T A C G T C G T A C G T A A C T G C A T G A T C G A T G C
A T G C G A T C G A C T A G C T C G A T C G A T G T C A C G A T T C G A A T C G T A G C T A G C

Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer

Match Rank:2
Score:0.68
Offset:2
Orientation:forward strand
Alignment:TTTTAAGGGC
--CTAATKGV
 A C G T A G C T G C A T A C G T C G T A C G T A A C T G C A T G A T C G A T G C
A C G T A C G T A G T C C G A T C T G A C G T A A C G T C A G T T C A G T G A C

HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer

Match Rank:3
Score:0.68
Offset:0
Orientation:forward strand
Alignment:TTTTAAGGGC
TTTTATKRGG
 A C G T A G C T G C A T A C G T C G T A C G T A A C T G C A T G A T C G A T G C
C G A T A C G T A C G T A C G T C G T A A G C T C A G T C T A G A T C G A C T G

HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer

Match Rank:4
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:TTTTAAGGGC
TTTTATTRGN
 A C G T A G C T G C A T A C G T C G T A C G T A A C T G C A T G A T C G A T G C
C G A T A C G T A C G T C G A T C G T A G C A T C A G T C T G A A T C G G C T A

ISL2/MA0914.1/Jaspar

Match Rank:5
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:TTTTAAGGGC
--TTAAGTGC
 A C G T A G C T G C A T A C G T C G T A C G T A A C T G C A T G A T C G A T G C
A C G T A C G T G A C T C G A T C T G A G C T A C A T G C G A T C T A G A T G C

Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer

Match Rank:6
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:TTTTAAGGGC
TTTAATTGCN
 A C G T A G C T G C A T A C G T C G T A C G T A A C T G C A T G A T C G A T G C
C G A T A G C T C G A T G C T A C G T A G A C T C A G T C T A G T A G C A T G C

HOXC13/MA0907.1/Jaspar

Match Rank:7
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-TTTTAAGGGC
NTTTTACGAGN
 A C G T A C G T A G C T G C A T A C G T C G T A C G T A A C T G C A T G A T C G A T G C
C G A T C G A T C G A T C G A T G C A T G T C A A G T C C T A G T C G A A T C G T G A C

HOXB13/MA0901.1/Jaspar

Match Rank:8
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-TTTTAAGGGC
NTTTTATTGG-
 A C G T A C G T A G C T G C A T A C G T C G T A C G T A A C T G C A T G A T C G A T G C
C A T G C A G T C A G T C G A T G C A T C T G A G C A T C A G T C T A G A T C G A C G T

HOXD13/MA0909.1/Jaspar

Match Rank:9
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-TTTTAAGGGC
NTTTTATTGG-
 A C G T A C G T A G C T G C A T A C G T C G T A C G T A A C T G C A T G A T C G A T G C
C A G T C A G T A C G T C G A T C G A T C T G A G C A T C A G T C T A G T A C G A C G T

NKX3-2/MA0122.2/Jaspar

Match Rank:10
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:TTTTAAGGGC-
--TTAAGTGGN
 A C G T A G C T G C A T A C G T C G T A C G T A A C T G C A T G A T C G A T G C A C G T
A C G T A C G T G A C T C G A T C T G A T C G A C A T G C G A T C T A G A T C G A G C T