Information for 11-GAGGCGCGCCGCA (Motif 13)

A C T G T G C A A T C G A T C G T A G C A T C G T A G C A C T G A T G C T A G C A T C G A T G C T C G A
Reverse Opposite:
A G C T A T C G A T G C A T C G T A C G A G T C A C T G A T G C A C T G A T G C A T G C A C G T T G A C
p-value:1e-9
log p-value:-2.236e+01
Information Content per bp:1.756
Number of Target Sequences with motif28.0
Percentage of Target Sequences with motif2.94%
Number of Background Sequences with motif303.5
Percentage of Background Sequences with motif0.67%
Average Position of motif in Targets53.6 +/- 23.5bp
Average Position of motif in Background47.2 +/- 37.0bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0008.1_E2F2_1/Jaspar

Match Rank:1
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---GAGGCGCGCCGCA
ATAAAGGCGCGCGAT-
 A C G T A C G T A C G T A C T G T G C A A T C G A T C G T A G C A T C G T A G C A C T G A T G C T A G C A T C G A T G C T C G A
C T G A G C A T C G T A G C T A C T G A T A C G A T C G T G A C A T C G A T G C A T C G G A T C T A C G G C T A G C A T A C G T

POL006.1_BREu/Jaspar

Match Rank:2
Score:0.65
Offset:2
Orientation:forward strand
Alignment:GAGGCGCGCCGCA
--AGCGCGCC---
 A C T G T G C A A T C G A T C G T A G C A T C G T A G C A C T G A T G C T A G C A T C G A T G C T C G A
A C G T A C G T T G C A T A C G T A G C T C A G T G A C A C T G A G T C A G T C A C G T A C G T A C G T

PB0095.1_Zfp161_1/Jaspar

Match Rank:3
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---GAGGCGCGCCGCA
NCANGCGCGCGCGCCA
 A C G T A C G T A C G T A C T G T G C A A T C G A T C G T A G C A T C G T A G C A C T G A T G C T A G C A T C G A T G C T C G A
G C A T G A T C C T G A C T A G C T A G G A T C T C A G G A T C C T A G A G T C C T A G A G T C T A C G G A T C G A T C G T C A

PB0009.1_E2F3_1/Jaspar

Match Rank:4
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---GAGGCGCGCCGCA
ATAAGGGCGCGCGAT-
 A C G T A C G T A C G T A C T G T G C A A T C G A T C G T A G C A T C G T A G C A C T G A T G C T A G C A T C G A T G C T C G A
T C G A G C A T C G T A G C T A C T A G T A C G T A C G T A G C A T C G A T G C A T C G G A T C A T C G G C T A G C A T A C G T

PB0180.1_Sp4_2/Jaspar

Match Rank:5
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--GAGGCGCGCCGCA
CAAAGGCGTGGCCAG
 A C G T A C G T A C T G T G C A A T C G A T C G T A G C A T C G T A G C A C T G A T G C T A G C A T C G A T G C T C G A
A G T C C G T A C G T A T C G A A T C G A C T G G T A C A C T G A C G T C T A G A C T G G A T C G A T C G T C A C A T G

SP2/MA0516.1/Jaspar

Match Rank:6
Score:0.60
Offset:-5
Orientation:reverse strand
Alignment:-----GAGGCGCGCCGCA
GGGNGGGGGCGGGGC---
 A C G T A C G T A C G T A C G T A C G T A C T G T G C A A T C G A T C G T A G C A T C G T A G C A C T G A T G C T A G C A T C G A T G C T C G A
T A C G T A C G T A C G T C G A C T A G C T A G C T A G C T A G A C T G G T A C C T A G A T C G C T A G T C A G T A G C A C G T A C G T A C G T

Sp1(Zf)/Promoter/Homer

Match Rank:7
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GAGGCGCGCCGCA
GGGGGCGGGGCC--
 A C G T A C T G T G C A A T C G A T C G T A G C A T C G T A G C A C T G A T G C T A G C A T C G A T G C T C G A
T C A G C A T G C T A G A C T G A C T G A G T C A C T G A C T G C T A G T A C G A G T C A T G C A C G T A C G T

PB0052.1_Plagl1_1/Jaspar

Match Rank:8
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GAGGCGCGCCGCA--
NNNGGGGCGCCCCCNN
 A C G T A C T G T G C A A T C G A T C G T A G C A T C G T A G C A C T G A T G C T A G C A T C G A T G C T C G A A C G T A C G T
A T G C A G C T T G C A C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C G A T C C T G A T G C A

PB0164.1_Smad3_2/Jaspar

Match Rank:9
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----GAGGCGCGCCGCA
NAGANTGGCGGGGNGNA
 A C G T A C G T A C G T A C G T A C T G T G C A A T C G A T C G T A G C A T C G T A G C A C T G A T G C T A G C A T C G A T G C T C G A
T G A C C T G A T C A G C T G A C A T G A C G T C A T G T C A G A T G C T A C G A T C G T C A G C T A G T A G C C A T G C A G T G T C A

PB0199.1_Zfp161_2/Jaspar

Match Rank:10
Score:0.55
Offset:2
Orientation:forward strand
Alignment:GAGGCGCGCCGCA---
--GCCGCGCAGTGCGT
 A C T G T G C A A T C G A T C G T A G C A T C G T A G C A C T G A T G C T A G C A T C G A T G C T C G A A C G T A C G T A C G T
A C G T A C G T C A T G G A T C A G T C T A C G G A T C C T A G T G A C G T C A C T A G A C G T C T A G G T A C T C A G A G C T