Motif 12

Information for 9-CCCCGCCTCCAGC (Motif 12)

Reverse Opposite:

p-value:	1e-10
log p-value:	-2.313e+01
Information Content per bp:	1.878
Number of Target Sequences with motif	16.0
Percentage of Target Sequences with motif	1.68%
Number of Background Sequences with motif	85.1
Percentage of Background Sequences with motif	0.19%
Average Position of motif in Targets	66.1 +/- 26.8bp
Average Position of motif in Background	47.9 +/- 33.6bp
Strand Bias (log2 ratio + to - strand density)	0.2
Multiplicity (# of sites on avg that occur together)	1.00
Motif File:	file (matrix) reverse opposite
SVG Files for Logos:	forward logo reverse opposite

Matches to Known Motifs

SP2/MA0516.1/Jaspar

Match Rank:	1
Score:	0.78
Offset:	-1
Orientation:	forward strand
Alignment:	-CCCCGCCTCCAGC- GCCCCGCCCCCTCCC

SP1/MA0079.3/Jaspar

Match Rank:	2
Score:	0.76
Offset:	-1
Orientation:	forward strand
Alignment:	-CCCCGCCTCCAGC GCCCCGCCCCC---

Sp1(Zf)/Promoter/Homer

Match Rank:	3
Score:	0.72
Offset:	-2
Orientation:	forward strand
Alignment:	--CCCCGCCTCCAGC GGCCCCGCCCCC---

POL003.1_GC-box/Jaspar

Match Rank:	4
Score:	0.71
Offset:	-3
Orientation:	reverse strand
Alignment:	---CCCCGCCTCCAGC NAGCCCCGCCCCCN--

EGR1/MA0162.2/Jaspar

Match Rank:	5
Score:	0.68
Offset:	-1
Orientation:	forward strand
Alignment:	-CCCCGCCTCCAGC CCCCCGCCCCCGCC

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:	6
Score:	0.67
Offset:	-1
Orientation:	reverse strand
Alignment:	-CCCCGCCTCCAGC GCTCCGCCCMCY--

Zfp281(Zf)/ES-Zfp281-ChIP-Seq(GSE81042)/Homer

Match Rank:	7
Score:	0.66
Offset:	0
Orientation:	forward strand
Alignment:	CCCCGCCTCCAGC CCCCTCCCCCAC-

KLF16/MA0741.1/Jaspar

Match Rank:	8
Score:	0.65
Offset:	-1
Orientation:	forward strand
Alignment:	-CCCCGCCTCCAGC GCCACGCCCCC---

PB0039.1_Klf7_1/Jaspar

Match Rank:	9
Score:	0.64
Offset:	-4
Orientation:	forward strand
Alignment:	----CCCCGCCTCCAGC TCGACCCCGCCCCTAT-

PB0164.1_Smad3_2/Jaspar

Match Rank:	10
Score:	0.64
Offset:	-4
Orientation:	forward strand
Alignment:	----CCCCGCCTCCAGC TACGCCCCGCCACTCTG