Information for 6-YCGCCCAGAAWCC (Motif 7)

A G T C A G T C A C T G A G T C A T G C A G T C C G T A A C T G C G T A C G T A C G A T A G T C A T G C
Reverse Opposite:
A T C G A C T G C G T A C G A T A C G T A G T C A C G T A C T G A T C G A C T G G T A C A C T G C T A G
p-value:1e-12
log p-value:-2.794e+01
Information Content per bp:1.853
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.74%
Number of Background Sequences with motif3.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets31.0 +/- 22.2bp
Average Position of motif in Background43.8 +/- 21.7bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:1
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-YCGCCCAGAAWCC-
ATTTCCCAGVAKSCY
 A C G T A G T C A G T C A C T G A G T C A T G C A G T C C G T A A C T G C G T A C G T A C G A T A G T C A T G C A C G T
T G C A G C A T A G C T G C A T A G T C A G T C A G T C C T G A A C T G T C G A T C G A C A G T A T C G A G T C G A T C

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:YCGCCCAGAAWCC
-TGCCCAGNHW--
 A G T C A G T C A C T G A G T C A T G C A G T C C G T A A C T G C G T A C G T A C G A T A G T C A T G C
A C G T C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A A C G T A C G T

Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer

Match Rank:3
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--YCGCCCAGAAWCC
TGTTKCCTAGCAACM
 A C G T A C G T A G T C A G T C A C T G A G T C A T G C A G T C C G T A A C T G C G T A C G T A C G A T A G T C A T G C
C A G T T C A G A G C T G A C T A C G T A G T C G A T C G A C T C T G A A C T G G A T C C G T A C T G A A G T C G T A C

THAP1/MA0597.1/Jaspar

Match Rank:4
Score:0.55
Offset:0
Orientation:forward strand
Alignment:YCGCCCAGAAWCC
CTGCCCGCA----
 A G T C A G T C A C T G A G T C A T G C A G T C C G T A A C T G C G T A C G T A C G A T A G T C A T G C
A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A A C G T A C G T A C G T A C G T

Stat5a::Stat5b/MA0519.1/Jaspar

Match Rank:5
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-YCGCCCAGAAWCC
ATTTCCAAGAA---
 A C G T A G T C A G T C A C T G A G T C A T G C A G T C C G T A A C T G C G T A C G T A C G A T A G T C A T G C
C T G A A G C T A C G T A G C T A G T C G A T C G T C A C T G A A C T G G C T A C T G A A C G T A C G T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:YCGCCCAGAAWCC-
----CCAGACRSVB
 A G T C A G T C A C T G A G T C A T G C A G T C C G T A A C T G C G T A C G T A C G A T A G T C A T G C A C G T
A C G T A C G T A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C

PB0110.1_Bcl6b_2/Jaspar

Match Rank:7
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----YCGCCCAGAAWCC
ATCCCCGCCCCTAAAA-
 A C G T A C G T A C G T A C G T A G T C A G T C A C T G A G T C A T G C A G T C C G T A A C T G C G T A C G T A C G A T A G T C A T G C
G T C A A C G T A T G C A T G C A G T C G A T C C T A G G A T C T G A C A T G C A G T C C G A T G C T A G T C A G C T A T G C A A C G T

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:8
Score:0.55
Offset:0
Orientation:forward strand
Alignment:YCGCCCAGAAWCC--
CCGCATAGCAACGGA
 A G T C A G T C A C T G A G T C A T G C A G T C C G T A A C T G C G T A C G T A C G A T A G T C A T G C A C G T A C G T
A G T C A G T C T A C G A T G C G C T A G A C T T C G A C T A G G A T C C T G A T C G A A G T C T A C G T C A G C T G A

PB0143.1_Klf7_2/Jaspar

Match Rank:9
Score:0.54
Offset:-6
Orientation:forward strand
Alignment:------YCGCCCAGAAWCC
AAGCATACGCCCAACTT--
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C A C T G A G T C A T G C A G T C C G T A A C T G C G T A C G T A C G A T A G T C A T G C
T G C A T C G A C T A G A G T C C G T A C G A T G T C A A G T C C T A G T A G C T A G C G A T C G T C A C G T A G T A C G C A T C A G T A C G T A C G T

STAT3/MA0144.2/Jaspar

Match Rank:10
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:YCGCCCAGAAWCC
TTTCCCAGAAN--
 A G T C A G T C A C T G A G T C A T G C A G T C C G T A A C T G C G T A C G T A C G A T A G T C A T G C
G A C T A C G T A C G T G A T C A G T C G T A C C T G A C T A G T G C A C G T A T C A G A C G T A C G T