Information for 17-AGAAAAAAAAAAG (Motif 29)

T C G A T C A G C T G A T C G A T C G A T C G A C G T A C T G A T C G A C T G A C T G A T C G A C T A G
Reverse Opposite:
G A T C A G C T G A C T A G C T A G C T G A C T G C A T A G C T A G C T A G C T G A C T A G T C A G C T
p-value:1e-5
log p-value:-1.304e+01
Information Content per bp:1.660
Number of Target Sequences with motif23.0
Percentage of Target Sequences with motif2.42%
Number of Background Sequences with motif345.1
Percentage of Background Sequences with motif0.76%
Average Position of motif in Targets63.9 +/- 25.4bp
Average Position of motif in Background44.8 +/- 39.3bp
Strand Bias (log2 ratio + to - strand density)-2.2
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0182.1_Srf_2/Jaspar

Match Rank:1
Score:0.79
Offset:-2
Orientation:forward strand
Alignment:--AGAAAAAAAAAAG--
GTTAAAAAAAAAAATTA
 A C G T A C G T T C G A T C A G C T G A T C G A T C G A T C G A C G T A C T G A T C G A C T G A C T G A T C G A C T A G A C G T A C G T
T A C G A C G T C G A T C G T A C T G A C T G A T G C A T G C A G T C A G C T A G T C A G T C A G T C A T G C A A C G T G C A T G C A T

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:2
Score:0.72
Offset:-4
Orientation:forward strand
Alignment:----AGAAAAAAAAAAG
TACTGGAAAAAAAA---
 A C G T A C G T A C G T A C G T T C G A T C A G C T G A T C G A T C G A T C G A C G T A C T G A T C G A C T G A C T G A T C G A C T A G
G C A T C T G A T G A C C A G T A C G T T C A G C G T A C G T A T C G A T C G A G C T A G T C A C G T A C T G A A C G T A C G T A C G T

PB0093.1_Zfp105_1/Jaspar

Match Rank:3
Score:0.67
Offset:0
Orientation:forward strand
Alignment:AGAAAAAAAAAAG--
AACAAACAACAAGAG
 T C G A T C A G C T G A T C G A T C G A T C G A C G T A C T G A T C G A C T G A C T G A T C G A C T A G A C G T A C G T
G C T A C G T A G A T C G T C A C G T A G C T A G A T C C T G A C G T A G T A C C T G A G C T A C A T G C G T A C T A G

PB0186.1_Tcf3_2/Jaspar

Match Rank:4
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---AGAAAAAAAAAAG
AGCCGAAAAAAAAAT-
 A C G T A C G T A C G T T C G A T C A G C T G A T C G A T C G A T C G A C G T A C T G A T C G A C T G A C T G A T C G A C T A G
C T G A T A C G A T G C T A G C A C T G C G T A C T G A G C T A G C T A G C T A T G C A G C T A T C G A G C T A G C A T A C G T

Sox3/MA0514.1/Jaspar

Match Rank:5
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:AGAAAAAAAAAAG
---AAAACAAAGG
 T C G A T C A G C T G A T C G A T C G A T C G A C G T A C T G A T C G A C T G A C T G A T C G A C T A G
A C G T A C G T A C G T T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G

PB0148.1_Mtf1_2/Jaspar

Match Rank:6
Score:0.62
Offset:0
Orientation:forward strand
Alignment:AGAAAAAAAAAAG-
AAATAAGAAAAAAC
 T C G A T C A G C T G A T C G A T C G A T C G A C G T A C T G A T C G A C T G A C T G A T C G A C T A G A C G T
G C T A C G T A G C T A C A G T G C T A G C T A C A T G G T C A G C T A G C T A G C T A T G C A C G T A T G A C

PB0116.1_Elf3_2/Jaspar

Match Rank:7
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---AGAAAAAAAAAAG-
GTTCAAAAAAAAAATTC
 A C G T A C G T A C G T T C G A T C A G C T G A T C G A T C G A T C G A C G T A C T G A T C G A C T G A C T G A T C G A C T A G A C G T
C A T G A G C T A C G T G T A C G T C A C G T A G C T A G C T A G C T A G C T A G C T A G C T A G C T A G T C A G A C T C G A T G A T C

T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer

Match Rank:8
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:AGAAAAAAAAAAG-
--AGAAACGAAAGT
 T C G A T C A G C T G A T C G A T C G A T C G A C G T A C T G A T C G A C T G A C T G A T C G A C T A G A C G T
A C G T A C G T T C G A C T A G C T G A C G T A C G T A A G T C T A C G C G T A C G T A C G T A A T C G A C G T

PB0119.1_Foxa2_2/Jaspar

Match Rank:9
Score:0.61
Offset:0
Orientation:forward strand
Alignment:AGAAAAAAAAAAG--
AAAAATAACAAACGG
 T C G A T C A G C T G A T C G A T C G A T C G A C G T A C T G A T C G A C T G A C T G A T C G A C T A G A C G T A C G T
T C G A T C G A C G T A C G T A G T C A A C G T C T G A C G T A G A T C G T C A G C T A C T G A T A G C T A C G A T C G

Tcf7/MA0769.1/Jaspar

Match Rank:10
Score:0.60
Offset:2
Orientation:forward strand
Alignment:AGAAAAAAAAAAG-
--AAAGATCAAAGG
 T C G A T C A G C T G A T C G A T C G A T C G A C G T A C T G A T C G A C T G A C T G A T C G A C T A G A C G T
A C G T A C G T C T G A C T G A C G T A A T C G C G T A A C G T A T G C C G T A T C G A C G T A C T A G T C A G