Information for 11-CRCGCNCAAAGCCGGG (Motif 23)

A G T C C T G A A T G C A C T G A G T C C G T A A T G C C T G A C T G A C G T A A T C G A T G C A T G C A C T G A T C G A C T G
Reverse Opposite:
A G T C A T G C G T A C A T C G A T C G A T G C A C G T A G C T A G C T A T C G C G A T A C T G G T A C A T C G G A C T A C T G
p-value:1e-8
log p-value:-2.067e+01
Information Content per bp:1.799
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.53%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets47.0 +/- 29.6bp
Average Position of motif in Background76.6 +/- 4.4bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:1
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:CRCGCNCAAAGCCGGG
CACGCA----------
 A G T C C T G A A T G C A C T G A G T C C G T A A T G C C T G A C T G A C G T A A T C G A T G C A T G C A C T G A T C G A C T G
A G T C C G T A G T A C C T A G G T A C C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZNF322(Zf)/HEK293-ZNF322.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-CRCGCNCAAAGCCGGG---
YCAGGCWCAGTACCAGGCTC
 A C G T A G T C C T G A A T G C A C T G A G T C C G T A A T G C C T G A C T G A C G T A A T C G A T G C A T G C A C T G A T C G A C T G A C G T A C G T A C G T
A G T C T G A C G C T A C T A G C T A G G A T C G C A T A T G C C G T A C T A G C A G T T C G A A T G C A G T C C G T A C A T G C T A G G T A C G A C T A T G C

SP2/MA0516.1/Jaspar

Match Rank:3
Score:0.51
Offset:3
Orientation:reverse strand
Alignment:CRCGCNCAAAGCCGGG--
---GGGNGGGGGCGGGGC
 A G T C C T G A A T G C A C T G A G T C C G T A A T G C C T G A C T G A C G T A A T C G A T G C A T G C A C T G A T C G A C T G A C G T A C G T
A C G T A C G T A C G T T A C G T A C G T A C G T C G A C T A G C T A G C T A G C T A G A C T G G T A C C T A G A T C G C T A G T C A G T A G C

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:4
Score:0.50
Offset:6
Orientation:forward strand
Alignment:CRCGCNCAAAGCCGGG--
------CACAGCAGGGGG
 A G T C C T G A A T G C A C T G A G T C C G T A A T G C C T G A C T G A C G T A A T C G A T G C A T G C A C T G A T C G A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G

ZIC1/MA0696.1/Jaspar

Match Rank:5
Score:0.50
Offset:6
Orientation:reverse strand
Alignment:CRCGCNCAAAGCCGGG----
------CACAGCGGGGGGTC
 A G T C C T G A A T G C A C T G A G T C C G T A A T G C C T G A C T G A C G T A A T C G A T G C A T G C A C T G A T C G A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T G A C C T G A A G T C T G C A T C A G A G T C C T A G C A T G T C A G C A T G C A T G C A T G A G C T T G A C

PB0164.1_Smad3_2/Jaspar

Match Rank:6
Score:0.49
Offset:4
Orientation:reverse strand
Alignment:CRCGCNCAAAGCCGGG-----
----NAGANTGGCGGGGNGNA
 A G T C C T G A A T G C A C T G A G T C C G T A A T G C C T G A C T G A C G T A A T C G A T G C A T G C A C T G A T C G A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T G A C C T G A T C A G C T G A C A T G A C G T C A T G T C A G A T G C T A C G A T C G T C A G C T A G T A G C C A T G C A G T G T C A

SPDEF/MA0686.1/Jaspar

Match Rank:7
Score:0.49
Offset:6
Orientation:reverse strand
Alignment:CRCGCNCAAAGCCGGG-
------TACATCCGGGT
 A G T C C T G A A T G C A C T G A G T C C G T A A T G C C T G A C T G A C G T A A T C G A T G C A T G C A C T G A T C G A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A C T C T G A A G T C C G T A G A C T G T A C A G T C A C T G A T C G A C T G G C A T

PB0199.1_Zfp161_2/Jaspar

Match Rank:8
Score:0.49
Offset:0
Orientation:forward strand
Alignment:CRCGCNCAAAGCCGGG
GCCGCGCAGTGCGT--
 A G T C C T G A A T G C A C T G A G T C C G T A A T G C C T G A C T G A C G T A A T C G A T G C A T G C A C T G A T C G A C T G
C A T G G A T C A G T C T A C G G A T C C T A G T G A C G T C A C T A G A C G T C T A G G T A C T C A G A G C T A C G T A C G T

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:9
Score:0.48
Offset:-3
Orientation:forward strand
Alignment:---CRCGCNCAAAGCCGGG
TBGCACGCAA---------
 A C G T A C G T A C G T A G T C C T G A A T G C A C T G A G T C C G T A A T G C C T G A C T G A C G T A A T C G A T G C A T G C A C T G A T C G A C T G
G C A T A T C G C A T G G T A C G C T A A G T C T C A G T G A C G T C A T G C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZIC3/MA0697.1/Jaspar

Match Rank:10
Score:0.48
Offset:3
Orientation:reverse strand
Alignment:CRCGCNCAAAGCCGGG--
---NCGCAGCGGGGGGTC
 A G T C C T G A A T G C A C T G A G T C C G T A A T G C C T G A C T G A C G T A A T C G A T G C A T G C A C T G A T C G A C T G A C G T A C G T
A C G T A C G T A C G T C A T G G T A C C T A G G A T C T G C A T C A G A G T C C T A G A C T G A C T G C A T G C A T G C A T G A G C T T G A C