Information for 11-GGGAGCTGGCCCT (Motif 17)

A C T G T A C G A T C G T C G A A T C G G A T C G A C T A T C G A T C G A G T C G T A C A G T C A C G T
Reverse Opposite:
C G T A C T A G A C T G C T A G A T G C T A G C C T G A C T A G A T G C A G C T A T G C A T G C G T A C
p-value:1e-9
log p-value:-2.189e+01
Information Content per bp:1.730
Number of Target Sequences with motif25.0
Percentage of Target Sequences with motif2.63%
Number of Background Sequences with motif248.6
Percentage of Background Sequences with motif0.55%
Average Position of motif in Targets50.3 +/- 26.8bp
Average Position of motif in Background47.9 +/- 27.9bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zfx/MA0146.2/Jaspar

Match Rank:1
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GGGAGCTGGCCCT-
GGGGCCGAGGCCTG
 A C T G T A C G A T C G T C G A A T C G G A T C G A C T A T C G A T C G A G T C G T A C A G T C A C G T A C G T
A T C G A T C G T A C G C T A G A T G C G A T C A C T G T G C A T C A G A T C G A G T C A G T C A G C T T A C G

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:2
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:GGGAGCTGGCCCT-
----BNTGDCCTTG
 A C T G T A C G A T C G T C G A A T C G G A T C G A C T A T C G A T C G A G T C G T A C A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G

Klf12/MA0742.1/Jaspar

Match Rank:3
Score:0.58
Offset:2
Orientation:forward strand
Alignment:GGGAGCTGGCCCT----
--GACCACGCCCTTATT
 A C T G T A C G A T C G T C G A A T C G G A T C G A C T A T C G A T C G A G T C G T A C A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C A T G T C G A G T A C T A G C T G C A G T A C C T A G A G T C A G T C A G T C G C A T G C A T G C T A G C A T G C A T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:4
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:GGGAGCTGGCCCT
----CTAGGCCT-
 A C T G T A C G A T C G T C G A A T C G G A T C G A C T A T C G A T C G A G T C G T A C A G T C A C G T
A C G T A C G T A C G T A C G T T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T A C G T

POL006.1_BREu/Jaspar

Match Rank:5
Score:0.56
Offset:3
Orientation:forward strand
Alignment:GGGAGCTGGCCCT
---AGCGCGCC--
 A C T G T A C G A T C G T C G A A T C G G A T C G A C T A T C G A T C G A G T C G T A C A G T C A C G T
A C G T A C G T A C G T T G C A T A C G T A G C T C A G T G A C A C T G A G T C A G T C A C G T A C G T

Nr5a2/MA0505.1/Jaspar

Match Rank:6
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:GGGAGCTGGCCCT------
----GCTGACCTTGAACTN
 A C T G T A C G A T C G T C G A A T C G G A T C G A C T A T C G A T C G A G T C G T A C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T A C G T G A C G C A T T C A G C T G A A G T C A G T C A G C T C A G T A T C G C T G A T C G A G A T C G A C T A G C T

PB0039.1_Klf7_1/Jaspar

Match Rank:7
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GGGAGCTGGCCCT---
TCGACCCCGCCCCTAT
 A C T G T A C G A T C G T C G A A T C G G A T C G A C T A T C G A T C G A G T C G T A C A G T C A C G T A C G T A C G T A C G T
G A C T A G T C C T A G T C G A G T A C G T A C T G A C G A T C C T A G A G T C A G T C A G T C G A T C G A C T G C T A C G A T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:GGGAGCTGGCCCT
----CNAGGCCT-
 A C T G T A C G A T C G T C G A A T C G G A T C G A C T A T C G A T C G A G T C G T A C A G T C A C G T
A C G T A C G T A C G T A C G T A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T A C G T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:9
Score:0.55
Offset:6
Orientation:reverse strand
Alignment:GGGAGCTGGCCCT---
------TGACCTTGAN
 A C T G T A C G A T C G T C G A A T C G G A T C G A C T A T C G A T C G A G T C G T A C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G C A T C T A G C T G A T G A C G A T C A G C T C A G T A T C G C T G A T G C A

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:10
Score:0.53
Offset:6
Orientation:reverse strand
Alignment:GGGAGCTGGCCCT---
------TGACCTTGAV
 A C T G T A C G A T C G T C G A A T C G G A T C G A C T A T C G A T C G A G T C G T A C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G C A T C T A G C T G A G A T C G T A C G A C T G A C T A T C G C T G A T G C A