Information for 10-CAGCCTTGCCAGC (Motif 14)

A G T C C G T A A T C G A G T C A G T C A C G T A C G T A C T G A G T C G T A C C G T A A C T G A G T C
Reverse Opposite:
A C T G A G T C A C G T A C T G A C T G A G T C C G T A C G T A A C T G A C T G A T G C A C G T A C T G
p-value:1e-10
log p-value:-2.322e+01
Information Content per bp:1.907
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.63%
Number of Background Sequences with motif3.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets45.2 +/- 28.7bp
Average Position of motif in Background49.1 +/- 18.3bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0151.1_Myf6_2/Jaspar

Match Rank:1
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----CAGCCTTGCCAGC
AGCAACAGCCGCACC---
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A A T C G A G T C A G T C A C G T A C G T A C T G A G T C G T A C C G T A A C T G A G T C
T C G A T A C G T G A C T C G A T G C A G A T C T C G A C T A G T G A C T A G C A T C G T A G C C T G A T G A C G A T C A C G T A C G T A C G T

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:2
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-CAGCCTTGCCAGC-
SCAGYCADGCATGAC
 A C G T A G T C C G T A A T C G A G T C A G T C A C G T A C G T A C T G A G T C G T A C C G T A A C T G A G T C A C G T
A T C G G T A C C G T A A T C G A G C T A T G C C G T A C T A G A T C G A G T C T C G A C A G T T C A G T C G A T G A C

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:3
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:CAGCCTTGCCAGC
----CTTGGCAA-
 A G T C C G T A A T C G A G T C A G T C A C G T A C G T A C T G A G T C G T A C C G T A A C T G A G T C
A C G T A C G T A C G T A C G T A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A A C G T

NFIX/MA0671.1/Jaspar

Match Rank:4
Score:0.55
Offset:4
Orientation:forward strand
Alignment:CAGCCTTGCCAGC
----CGTGCCAAG
 A G T C C G T A A T C G A G T C A G T C A C G T A C G T A C T G A G T C G T A C C G T A A C T G A G T C
A C G T A C G T A C G T A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G

NFIC/MA0161.1/Jaspar

Match Rank:5
Score:0.54
Offset:6
Orientation:reverse strand
Alignment:CAGCCTTGCCAGC
------TGCCAA-
 A G T C C G T A A T C G A G T C A G T C A C G T A C G T A C T G A G T C G T A C C G T A A C T G A G T C
A C G T A C G T A C G T A C G T A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:6
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-CAGCCTTGCCAGC
BCAGACWA------
 A C G T A G T C C G T A A T C G A G T C A G T C A C G T A C G T A C T G A G T C G T A C C G T A A C T G A G T C
A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T A C G T A C G T A C G T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:7
Score:0.53
Offset:9
Orientation:forward strand
Alignment:CAGCCTTGCCAGC-
---------CAGCC
 A G T C C G T A A T C G A G T C A G T C A C G T A C G T A C T G A G T C G T A C C G T A A C T G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C

MEIS2/MA0774.1/Jaspar

Match Rank:8
Score:0.53
Offset:5
Orientation:forward strand
Alignment:CAGCCTTGCCAGC
-----TTGACAGC
 A G T C C G T A A T C G A G T C A G T C A C G T A C G T A C T G A G T C G T A C C G T A A C T G A G T C
A C G T A C G T A C G T A C G T A C G T C G A T C A G T A C T G C G T A G T A C T G C A T A C G T A G C

REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer

Match Rank:9
Score:0.53
Offset:-4
Orientation:reverse strand
Alignment:----CAGCCTTGCCAGC---
TCAGCACCATGGACAGCTCC
 A C G T A C G T A C G T A C G T A G T C C G T A A T C G A G T C A G T C A C G T A C G T A C T G A G T C G T A C C G T A A C T G A G T C A C G T A C G T A C G T
A G C T G A T C C T G A T C A G T A G C C T G A A T G C G A T C G C T A G A C T C T A G C T A G G T C A A T G C C G T A T C A G G T A C C A G T T A G C G A T C

Hic1/MA0739.1/Jaspar

Match Rank:10
Score:0.52
Offset:5
Orientation:forward strand
Alignment:CAGCCTTGCCAGC-
-----ATGCCAACC
 A G T C C G T A A T C G A G T C A G T C A C G T A C G T A C T G A G T C G T A C C G T A A C T G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T T C G A A G C T T C A G T A G C G T A C G T C A T C G A A T G C A G T C