Information for 7-CGCGCCCAGTCTGGCT (Motif 13)

A T G C A T C G A G T C A C T G A G T C A G T C A T G C C G T A A C T G A C G T A G T C A G C T A C T G A C T G A G T C A C G T
Reverse Opposite:
C G T A A C T G A G T C A G T C C T G A A C T G T C G A A G T C A C G T A T C G A C T G A C T G A G T C A C T G A T G C A T C G
p-value:1e-10
log p-value:-2.412e+01
Information Content per bp:1.887
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.53%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets49.0 +/- 13.7bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:CGCGCCCAGTCTGGCT
--TGCCCAGNHW----
 A T G C A T C G A G T C A C T G A G T C A G T C A T G C C G T A A C T G A C G T A G T C A G C T A C T G A C T G A G T C A C G T
A C G T A C G T C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A A C G T A C G T A C G T A C G T

POL006.1_BREu/Jaspar

Match Rank:2
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--CGCGCCCAGTCTGGCT
AGCGCGCC----------
 A C G T A C G T A T G C A T C G A G T C A C T G A G T C A G T C A T G C C G T A A C T G A C G T A G T C A G C T A C T G A C T G A G T C A C G T
T G C A T A C G T A G C T C A G T G A C A C T G A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:3
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:CGCGCCCAGTCTGGCT--
---TCCCAGMCRAGCCCC
 A T G C A T C G A G T C A C T G A G T C A G T C A T G C C G T A A C T G A C G T A G T C A G C T A C T G A C T G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A G C T A G T C A G T C A G T C C T G A T C A G T G C A G A T C T C G A C G T A A C T G A T G C G T A C G T A C G A T C

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:4
Score:0.54
Offset:3
Orientation:forward strand
Alignment:CGCGCCCAGTCTGGCT--
---GTCATGCHTGRCTGS
 A T G C A T C G A G T C A C T G A G T C A G T C A T G C C G T A A C T G A C G T A G T C A G C T A C T G A C T G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C T G A G C T A G T C G T C A A G C T T C A G A T G C G A T C G C A T A T C G T C G A T A G C C G A T C A T G T A G C

Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:5
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:CGCGCCCAGTCTGGCT
YCCGCCCACGCN----
 A T G C A T C G A G T C A C T G A G T C A G T C A T G C C G T A A C T G A C G T A G T C A G C T A C T G A C T G A G T C A C G T
G A T C G T A C G A T C C T A G A G T C A G T C A G T C G T C A A G T C C T A G A T G C T C G A A C G T A C G T A C G T A C G T

E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer

Match Rank:6
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---CGCGCCCAGTCTGGCT
TTTCCCGCCMAV-------
 A C G T A C G T A C G T A T G C A T C G A G T C A C T G A G T C A G T C A T G C C G T A A C T G A C G T A G T C A G C T A C T G A C T G A G T C A C G T
C G A T G A C T A C G T A T G C A T G C A G T C A C T G A T G C T A G C G T A C T G C A T G A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:7
Score:0.54
Offset:7
Orientation:forward strand
Alignment:CGCGCCCAGTCTGGCT-
-------GGTCTGGCAT
 A T G C A T C G A G T C A C T G A G T C A G T C A T G C C G T A A C T G A C G T A G T C A G C T A C T G A C T G A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T

GLI2/MA0734.1/Jaspar

Match Rank:8
Score:0.54
Offset:1
Orientation:forward strand
Alignment:CGCGCCCAGTCTGGCT
-GCGACCACACTG---
 A T G C A T C G A G T C A C T G A G T C A G T C A T G C C G T A A C T G A C G T A G T C A G C T A C T G A C T G A G T C A C G T
A C G T C T A G T G A C C A T G T G C A A G T C A T G C G T C A A T G C T G C A G T A C C G A T C T A G A C G T A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:9
Score:0.53
Offset:6
Orientation:forward strand
Alignment:CGCGCCCAGTCTGGCT
------CTGTCTGG--
 A T G C A T C G A G T C A C T G A G T C A G T C A T G C C G T A A C T G A C G T A G T C A G C T A C T G A C T G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T

EGR2/MA0472.2/Jaspar

Match Rank:10
Score:0.52
Offset:1
Orientation:forward strand
Alignment:CGCGCCCAGTCTGGCT
-ACGCCCACGCA----
 A T G C A T C G A G T C A C T G A G T C A G T C A T G C C G T A A C T G A C G T A G T C A G C T A C T G A C T G A G T C A C G T
A C G T G T C A A G T C C T A G A G T C T G A C A G T C T G C A A G T C C A T G A G T C C T G A A C G T A C G T A C G T A C G T