Information for 4-CDSTGGCGSCGCC (Motif 2)

T A G C C T G A T A C G A G C T C T A G A T C G T A G C C T A G A T C G G T A C T C A G A G T C G T A C
Reverse Opposite:
C A T G C T A G A G T C C A T G A T G C A G T C A T C G A T G C G A T C T C G A A T G C G A C T A T C G
p-value:1e-11
log p-value:-2.687e+01
Information Content per bp:1.628
Number of Target Sequences with motif41.0
Percentage of Target Sequences with motif4.88%
Number of Background Sequences with motif623.5
Percentage of Background Sequences with motif1.31%
Average Position of motif in Targets47.7 +/- 20.3bp
Average Position of motif in Background52.1 +/- 31.2bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0112.1_E2F2_2/Jaspar

Match Rank:1
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--CDSTGGCGSCGCC--
NNNNTTGGCGCCGANNN
 A C G T A C G T T A G C C T G A T A C G A G C T C T A G A T C G T A G C C T A G A T C G G T A C T C A G A G T C G T A C A C G T A C G T
T A G C T G A C A G C T A G C T C A G T G A C T C T A G A T C G G T A C A C T G T A G C G A T C C T A G G C T A T C G A A T C G C A T G

PB0113.1_E2F3_2/Jaspar

Match Rank:2
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--CDSTGGCGSCGCC--
NNNNTTGGCGCCGANNN
 A C G T A C G T T A G C C T G A T A C G A G C T C T A G A T C G T A G C C T A G A T C G G T A C T C A G A G T C G T A C A C G T A C G T
T A C G T A G C A C G T G A C T A C G T G C A T C T A G A T C G G T A C A C T G A T G C A G T C C T A G G C T A C T A G A T G C C A G T

Sp1(Zf)/Promoter/Homer

Match Rank:3
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:CDSTGGCGSCGCC
-GGGGGCGGGGCC
 T A G C C T G A T A C G A G C T C T A G A T C G T A G C C T A G A T C G G T A C T C A G A G T C G T A C
A C G T T C A G C A T G C T A G A C T G A C T G A G T C A C T G A C T G C T A G T A C G A G T C A T G C

PB0164.1_Smad3_2/Jaspar

Match Rank:4
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--CDSTGGCGSCGCC--
NAGANTGGCGGGGNGNA
 A C G T A C G T T A G C C T G A T A C G A G C T C T A G A T C G T A G C C T A G A T C G G T A C T C A G A G T C G T A C A C G T A C G T
T G A C C T G A T C A G C T G A C A T G A C G T C A T G T C A G A T G C T A C G A T C G T C A G C T A G T A G C C A T G C A G T G T C A

PB0052.1_Plagl1_1/Jaspar

Match Rank:5
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-CDSTGGCGSCGCC--
NNNGGGGCGCCCCCNN
 A C G T T A G C C T G A T A C G A G C T C T A G A T C G T A G C C T A G A T C G G T A C T C A G A G T C G T A C A C G T A C G T
A T G C A G C T T G C A C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C G A T C C T G A T G C A

E2F1/MA0024.3/Jaspar

Match Rank:6
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:CDSTGGCGSCGCC
-TTTGGCGCCAAA
 T A G C C T G A T A C G A G C T C T A G A T C G T A G C C T A G A T C G G T A C T C A G A G T C G T A C
A C G T G C A T C G A T C A G T T C A G A T C G A T G C C T A G A T G C A T G C G C T A G C T A C G T A

SP2/MA0516.1/Jaspar

Match Rank:7
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---CDSTGGCGSCGCC
GGGNGGGGGCGGGGC-
 A C G T A C G T A C G T T A G C C T G A T A C G A G C T C T A G A T C G T A G C C T A G A T C G G T A C T C A G A G T C G T A C
T A C G T A C G T A C G T C G A C T A G C T A G C T A G C T A G A C T G G T A C C T A G A T C G C T A G T C A G T A G C A C G T

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:8
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CDSTGGCGSCGCC
RGKGGGCGGAGC-
 T A G C C T G A T A C G A G C T C T A G A T C G T A G C C T A G A T C G G T A C T C A G A G T C G T A C
C T G A T C A G C A G T C T A G A C T G C T A G G A T C A T C G A C T G C T G A T C A G G A T C A C G T

SP1/MA0079.3/Jaspar

Match Rank:9
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CDSTGGCGSCGCC
-GGGGGCGGGGC-
 T A G C C T G A T A C G A G C T C T A G A T C G T A G C C T A G A T C G G T A C T C A G A G T C G T A C
A C G T T C A G C T A G C T A G A C T G A C T G G T A C C T A G A C T G C T A G T C A G T G A C A C G T

POL006.1_BREu/Jaspar

Match Rank:10
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:CDSTGGCGSCGCC
----GGCGCGCT-
 T A G C C T G A T A C G A G C T C T A G A T C G T A G C C T A G A T C G G T A C T C A G A G T C G T A C
A C G T A C G T A C G T A C G T C T A G T A C G A G T C A C T G A G T C A T C G A T G C A C G T A C G T