Information for 17-TGGCATAGTCTGA (Motif 27)

A C G T A C T G A C T G G T A C C G T A A C G T C G T A A T C G A C G T A T G C A C G T A C T G C G T A
Reverse Opposite:
A C G T A G T C C G T A A T C G C G T A A T G C A C G T C G T A A C G T A C T G A G T C A G T C G T C A
p-value:1e-4
log p-value:-9.774e+00
Information Content per bp:1.934
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif0.37%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets43.5 +/- 0.5bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:1
Score:0.61
Offset:5
Orientation:forward strand
Alignment:TGGCATAGTCTGA
-----TWGTCTGV
 A C G T A C T G A C T G G T A C C G T A A C G T C G T A A T C G A C G T A T G C A C G T A C T G C G T A
A C G T A C G T A C G T A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G

Hic1/MA0739.1/Jaspar

Match Rank:2
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---TGGCATAGTCTGA
GGTTGGCAT-------
 A C G T A C G T A C G T A C G T A C T G A C T G G T A C C G T A A C G T C G T A A T C G A C G T A T G C A C G T A C T G C G T A
T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0029.1_Hic1_1/Jaspar

Match Rank:3
Score:0.58
Offset:-7
Orientation:reverse strand
Alignment:-------TGGCATAGTCTGA
NGTAGGTTGGCATNNN----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G G T A C C G T A A C G T C G T A A T C G A C G T A T G C A C G T A C T G C G T A
C T A G C T A G A G C T C G T A T C A G T C A G A C G T C A G T A C T G A T C G A G T C C G T A G A C T T G C A T C A G G C A T A C G T A C G T A C G T A C G T

HIC2/MA0738.1/Jaspar

Match Rank:4
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---TGGCATAGTCTGA
NGTGGGCAT-------
 A C G T A C G T A C G T A C G T A C T G A C T G G T A C C G T A A C G T C G T A A T C G A C G T A T G C A C G T A C T G C G T A
T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:5
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-TGGCATAGTCTGA
TTGGCA--------
 A C G T A C G T A C T G A C T G G T A C C G T A A C G T C G T A A T C G A C G T A T G C A C G T A C T G C G T A
G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:6
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--TGGCATAGTCTGA
NTTGGCANN------
 A C G T A C G T A C G T A C T G A C T G G T A C C G T A A C G T C G T A A T C G A C G T A T G C A C G T A C T G C G T A
A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G A C G T A C G T A C G T A C G T A C G T A C G T

Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:TGGCATAGTCTGA-
----ATGGGGTGAT
 A C G T A C T G A C T G G T A C C G T A A C G T C G T A A T C G A C G T A T G C A C G T A C T G C G T A A C G T
A C G T A C G T A C G T A C G T T C G A A G C T C A T G A C T G A T C G T A C G G A C T A T C G C G T A A G C T

NFIA/MA0670.1/Jaspar

Match Rank:8
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---TGGCATAGTCTGA
NNTTGGCANN------
 A C G T A C G T A C G T A C G T A C T G A C T G G T A C C G T A A C G T C G T A A T C G A C G T A T G C A C G T A C T G C G T A
G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C A C G T A C G T A C G T A C G T A C G T A C G T

SREBF2/MA0596.1/Jaspar

Match Rank:9
Score:0.53
Offset:4
Orientation:forward strand
Alignment:TGGCATAGTCTGA-
----ATGGGGTGAT
 A C G T A C T G A C T G G T A C C G T A A C G T C G T A A T C G A C G T A T G C A C G T A C T G C G T A A C G T
A C G T A C G T A C G T A C G T T C G A A C G T A T C G C T A G A T C G T A C G A C G T A C T G C G T A A G C T

PB0168.1_Sox14_2/Jaspar

Match Rank:10
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-TGGCATAGTCTGA-
NNNCCATTGTGTNAN
 A C G T A C G T A C T G A C T G G T A C C G T A A C G T C G T A A T C G A C G T A T G C A C G T A C T G C G T A A C G T
A T C G T G A C A C T G A G T C G A T C C G T A A C G T A C G T T A C G G C A T A T C G A G C T T C A G T G C A T C A G