p-value: | 1e-5 |
log p-value: | -1.334e+01 |
Information Content per bp: | 1.948 |
Number of Target Sequences with motif | 3.0 |
Percentage of Target Sequences with motif | 0.56% |
Number of Background Sequences with motif | 3.0 |
Percentage of Background Sequences with motif | 0.01% |
Average Position of motif in Targets | 55.6 +/- 20.4bp |
Average Position of motif in Background | 56.0 +/- 29.8bp |
Strand Bias (log2 ratio + to - strand density) | -2.0 |
Multiplicity (# of sites on avg that occur together) | 1.67 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer
Match Rank: | 1 |
Score: | 0.60 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | TCAGTGCAGGAGG-- ---SDGCAGGTGCNS |
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Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer
Match Rank: | 2 |
Score: | 0.60 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | TCAGTGCAGGAGG -CACAGCAGGGGG |
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Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer
Match Rank: | 3 |
Score: | 0.59 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | TCAGTGCAGGAGG-- DCHCAGCAGGRGGCC |
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Zfp281(Zf)/ES-Zfp281-ChIP-Seq(GSE81042)/Homer
Match Rank: | 4 |
Score: | 0.58 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | TCAGTGCAGGAGG-- ---GTGGGGGAGGGG |
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E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer
Match Rank: | 5 |
Score: | 0.56 |
Offset: | 4 |
Orientation: | reverse strand |
Alignment: | TCAGTGCAGGAGG- ----NNCAGGTGNN |
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ZIC1/MA0696.1/Jaspar
Match Rank: | 6 |
Score: | 0.55 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | TCAGTGCAGGAGG-- -CACAGCGGGGGGTC |
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PB0091.1_Zbtb3_1/Jaspar
Match Rank: | 7 |
Score: | 0.54 |
Offset: | -4 |
Orientation: | forward strand |
Alignment: | ----TCAGTGCAGGAGG AATCGCACTGCATTCCG |
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ZIC4/MA0751.1/Jaspar
Match Rank: | 8 |
Score: | 0.54 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | TCAGTGCAGGAGG-- NCNCAGCGGGGGGTC |
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ZIC3/MA0697.1/Jaspar
Match Rank: | 9 |
Score: | 0.54 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | TCAGTGCAGGAGG-- NCGCAGCGGGGGGTC |
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PB0205.1_Zic1_2/Jaspar
Match Rank: | 10 |
Score: | 0.53 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --TCAGTGCAGGAGG CCACACAGCAGGAGA |
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