Information for 7-ARACRWGCCASGC (Motif 13)

C G T A T C G A C G T A A G T C C T G A C G A T A C T G A G T C A G T C C G T A A T G C A T C G A G T C
Reverse Opposite:
A C T G A T G C A T C G A C G T A C T G A C T G A G T C C G T A A G C T A C T G A C G T A G C T A C G T
p-value:1e-9
log p-value:-2.202e+01
Information Content per bp:1.874
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.93%
Number of Background Sequences with motif3.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets42.0 +/- 14.7bp
Average Position of motif in Background28.3 +/- 13.9bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0147.1_Max_2/Jaspar

Match Rank:1
Score:0.60
Offset:4
Orientation:forward strand
Alignment:ARACRWGCCASGC-----
----GTGCCACGCGACTG
 C G T A T C G A C G T A A G T C C T G A C G A T A C T G A G T C A G T C C G T A A T G C A T C G A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C T G A G C T A C T G G A T C A G T C C G T A A G T C T C A G G A T C A C T G T C G A T G A C C A G T C A T G

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:2
Score:0.60
Offset:8
Orientation:reverse strand
Alignment:ARACRWGCCASGC-
--------CACGCA
 C G T A T C G A C G T A A G T C C T G A C G A T A C T G A G T C A G T C C G T A A T G C A T C G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A G T A C C T A G G T A C C T G A

PB0180.1_Sp4_2/Jaspar

Match Rank:3
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:ARACRWGCCASGC-----
---NNGGCCACGCCTTTN
 C G T A T C G A C G T A A G T C C T G A C G A T A C T G A G T C A G T C C G T A A T G C A T C G A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G T A C C A G T C T A G C T A G T G A C G A T C T G C A T G A C A C T G T G A C T A G C A G C T G C A T G C A T T C A G

NFIX/MA0671.1/Jaspar

Match Rank:4
Score:0.60
Offset:3
Orientation:forward strand
Alignment:ARACRWGCCASGC
---CGTGCCAAG-
 C G T A T C G A C G T A A G T C C T G A C G A T A C T G A G T C A G T C C G T A A T G C A T C G A G T C
A C G T A C G T A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T

SP4/MA0685.1/Jaspar

Match Rank:5
Score:0.59
Offset:3
Orientation:forward strand
Alignment:ARACRWGCCASGC-------
---TAAGCCACGCCCCCTTT
 C G T A T C G A C G T A A G T C C T G A C G A T A C T G A G T C A G T C C G T A A T G C A T C G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A G C T G C T A C T G A C T A G G T A C A G T C T G C A G T A C A C T G T A G C T G A C A G T C G T A C G A T C G C A T G A C T G A C T

Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer

Match Rank:6
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--ARACRWGCCASGC
TGACANARRCCAGRC
 A C G T A C G T C G T A T C G A C G T A A G T C C T G A C G A T A C T G A G T C A G T C C G T A A T G C A T C G A G T C
C G A T C T A G C T G A A T G C C T G A T C G A C G T A C T G A T C G A T A G C A G T C C G T A A C T G T C G A A T G C

Hic1/MA0739.1/Jaspar

Match Rank:7
Score:0.59
Offset:4
Orientation:forward strand
Alignment:ARACRWGCCASGC
----ATGCCAACC
 C G T A T C G A C G T A A G T C C T G A C G A T A C T G A G T C A G T C C G T A A T G C A T C G A G T C
A C G T A C G T A C G T A C G T T C G A A G C T T C A G T A G C G T A C G T C A T C G A A T G C A G T C

NFIC/MA0161.1/Jaspar

Match Rank:8
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:ARACRWGCCASGC
-----TGCCAA--
 C G T A T C G A C G T A A G T C C T G A C G A T A C T G A G T C A G T C C G T A A T G C A T C G A G T C
A C G T A C G T A C G T A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T

PB0029.1_Hic1_1/Jaspar

Match Rank:9
Score:0.57
Offset:1
Orientation:forward strand
Alignment:ARACRWGCCASGC----
-ACTATGCCAACCTACC
 C G T A T C G A C G T A A G T C C T G A C G A T A C T G A G T C A G T C C G T A A T G C A T C G A G T C A C G T A C G T A C G T A C G T
A C G T C G T A A G T C A C G T C T G A A C G T C T A G A T G C A G T C G T C A T G C A A G T C A G T C G C A T C T G A G A T C G A T C

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:10
Score:0.57
Offset:0
Orientation:forward strand
Alignment:ARACRWGCCASGC
RTACGTGC-----
 C G T A T C G A C G T A A G T C C T G A C G A T A C T G A G T C A G T C C G T A A T G C A T C G A G T C
C T G A C A G T C T G A A G T C C T A G G A C T A T C G G T A C A C G T A C G T A C G T A C G T A C G T