Information for 3-TAGAACAAATHATGCA (Motif 8)

C A G T G T C A A T C G G T C A C G T A A T G C G T C A G T C A C G T A C G A T G A C T C G T A A C G T A C T G A G T C C G T A
Reverse Opposite:
A C G T A C T G G T A C C G T A A C G T C T G A C G T A C G A T A C G T A C G T A T C G C G A T A C G T T A G C A C G T G T C A
p-value:1e-11
log p-value:-2.596e+01
Information Content per bp:1.818
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.71%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets68.4 +/- 17.0bp
Average Position of motif in Background23.6 +/- 0.5bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POU4F1/MA0790.1/Jaspar

Match Rank:1
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:TAGAACAAATHATGCA-
---CATTAATTATTCAT
 C A G T G T C A A T C G G T C A C G T A A T G C G T C A G T C A C G T A C G A T G A C T C G T A A C G T A C T G A G T C C G T A A C G T
A C G T A C G T A C G T G T A C C T G A A G C T G C A T G C T A G C T A G C A T G C A T C G T A C G A T C A G T G A T C C T G A A G C T

PB0146.1_Mafk_2/Jaspar

Match Rank:2
Score:0.64
Offset:4
Orientation:forward strand
Alignment:TAGAACAAATHATGCA---
----GAAAAAATTGCAAGG
 C A G T G T C A A T C G G T C A C G T A A T G C G T C A G T C A C G T A C G A T G A C T C G T A A C G T A C T G A G T C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C A G G T C A T C G A C T G A C T G A G C T A G C T A C A G T A G C T C A T G A G T C T G C A G T C A A T C G T C A G

POU4F3/MA0791.1/Jaspar

Match Rank:3
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:TAGAACAAATHATGCA-
-CTCATTAATTATGCAT
 C A G T G T C A A T C G G T C A C G T A A T G C G T C A G T C A C G T A C G A T G A C T C G T A A C G T A C T G A G T C C G T A A C G T
A C G T A G T C C A G T G T A C C T G A G A C T G C A T G C T A G C T A G C A T G C A T G C T A C G A T C A T G G A T C T C G A G A C T

PH0148.1_Pou3f3/Jaspar

Match Rank:4
Score:0.59
Offset:6
Orientation:forward strand
Alignment:TAGAACAAATHATGCA-------
------AAAATATGCATAATAAA
 C A G T G T C A A T C G G T C A C G T A A T G C G T C A G T C A C G T A C G A T G A C T C G T A A C G T A C T G A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G C T A G C T A C T A G C G T A G A C T G C T A G A C T C A T G G T A C C T G A C G A T C G T A G C T A C A G T C T G A C G T A C G T A

Pit1+1bp(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:5
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:TAGAACAAATHATGCA-
-----TGAATTATGCAT
 C A G T G T C A A T C G G T C A C G T A A T G C G T C A G T C A C G T A C G A T G A C T C G T A A C G T A C T G A G T C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T C G A T C T A G G T C A G C T A C G A T G C A T G C T A C G A T C A T G G A T C G C T A C G A T

POU4F2/MA0683.1/Jaspar

Match Rank:6
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:TAGAACAAATHATGCA-
-CTCATTAATTATGCAT
 C A G T G T C A A T C G G T C A C G T A A T G C G T C A G T C A C G T A C G A T G A C T C G T A A C G T A C T G A G T C C G T A A C G T
A C G T A G T C G A C T T G A C T G C A A G C T G A C T C G T A C G T A C G A T G C A T C G T A C G A T C A T G G A T C C T G A G A C T

Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:7
Score:0.56
Offset:7
Orientation:reverse strand
Alignment:TAGAACAAATHATGCA-
-------GAATATTCAT
 C A G T G T C A A T C G G T C A C G T A A T G C G T C A G T C A C G T A C G A T G A C T C G T A A C G T A C T G A G T C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G G T C A C G T A A G C T C G T A G A C T C A G T A T G C T C G A C G A T

PH0037.1_Hdx/Jaspar

Match Rank:8
Score:0.55
Offset:0
Orientation:forward strand
Alignment:TAGAACAAATHATGCA-
AAGGCGAAATCATCGCA
 C A G T G T C A A T C G G T C A C G T A A T G C G T C A G T C A C G T A C G A T G A C T C G T A A C G T A C T G A G T C C G T A A C G T
C G T A C T G A A C T G C A T G G T A C C T A G T G C A C G T A C G T A A C G T A T G C G C T A G A C T G A T C A T C G G T A C T G C A

POU2F2/MA0507.1/Jaspar

Match Rank:9
Score:0.55
Offset:9
Orientation:reverse strand
Alignment:TAGAACAAATHATGCA------
---------ATATGCAAATNNN
 C A G T G T C A A T C G G T C A C G T A A T G C G T C A G T C A C G T A C G A T G A C T C G T A A C G T A C T G A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A G A C T C T G A A C G T C T A G G A T C C G T A C G T A C G T A C G A T C A T G G T C A C T G A

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.54
Offset:9
Orientation:reverse strand
Alignment:TAGAACAAATHATGCA---
---------TTATGCAAAT
 C A G T G T C A A T C G G T C A C G T A A T G C G T C A G T C A C G T A C G A T G A C T C G T A A C G T A C T G A G T C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T G C A T C T G A A C G T A C T G A G T C C G T A C T G A C G T A C G A T