Information for 7-HTCTCTGTTMYCTGAA (Motif 15)

G T C A A G C T A G T C A G C T A G T C C G A T A T C G A G C T A C G T G T C A A G C T A G T C A C G T A C T G T C G A C G T A
Reverse Opposite:
A C G T A C G T A G T C C G T A C T A G C T G A A C G T T C G A T C G A T A G C C G T A C T A G C T G A C T A G C T G A C A G T
p-value:1e-9
log p-value:-2.251e+01
Information Content per bp:1.726
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.71%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets37.0 +/- 27.3bp
Average Position of motif in Background34.2 +/- 16.9bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:1
Score:0.53
Offset:1
Orientation:forward strand
Alignment:HTCTCTGTTMYCTGAA
-YCTTTGTTCC-----
 G T C A A G C T A G T C A G C T A G T C C G A T A T C G A G C T A C G T G T C A A G C T A G T C A C G T A C T G T C G A C G T A
A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A G T C A G T C A C G T A C G T A C G T A C G T A C G T

PB0071.1_Sox4_1/Jaspar

Match Rank:2
Score:0.51
Offset:-3
Orientation:reverse strand
Alignment:---HTCTCTGTTMYCTGAA
TNNTCCTTTGTTCTNNT--
 A C G T A C G T A C G T G T C A A G C T A G T C A G C T A G T C C G A T A T C G A G C T A C G T G T C A A G C T A G T C A C G T A C T G T C G A C G T A
C G A T C G T A T C A G A G C T A G T C A G T C C G A T A C G T C G A T T A C G C G A T A G C T G A T C G C A T G A C T T G A C C A G T A C G T A C G T

PB0170.1_Sox17_2/Jaspar

Match Rank:3
Score:0.51
Offset:6
Orientation:reverse strand
Alignment:HTCTCTGTTMYCTGAA-------
------NTTNTATGAATGTGNNC
 G T C A A G C T A G T C A G C T A G T C C G A T A T C G A G C T A C G T G T C A A G C T A G T C A C G T A C T G T C G A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G C T A G C A T A G C T C T A G A G C T T C G A A G C T A C T G G C T A C T G A C G A T T C A G C A G T C A T G T C A G C G A T A T G C

PB0178.1_Sox8_2/Jaspar

Match Rank:4
Score:0.51
Offset:5
Orientation:reverse strand
Alignment:HTCTCTGTTMYCTGAA---
-----NNTNTCATGAATGT
 G T C A A G C T A G T C A G C T A G T C C G A T A T C G A G C T A C G T G T C A A G C T A G T C A C G T A C T G T C G A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T G C T A C G C A G T A C T G C G A T G A T C T G C A A G C T C T A G C G T A T C G A C G A T C T A G G A C T

PB0061.1_Sox11_1/Jaspar

Match Rank:5
Score:0.50
Offset:-3
Orientation:reverse strand
Alignment:---HTCTCTGTTMYCTGAA
NNNTCCTTTGTTCTNNN--
 A C G T A C G T A C G T G T C A A G C T A G T C A G C T A G T C C G A T A T C G A G C T A C G T G T C A A G C T A G T C A C G T A C T G T C G A C G T A
C G A T C G T A T C A G A G C T A G T C G A T C C G A T A C G T C G A T A C T G C G A T A G C T G A T C G C A T G C A T T G C A C G A T A C G T A C G T

PB0005.1_Bbx_1/Jaspar

Match Rank:6
Score:0.49
Offset:4
Orientation:reverse strand
Alignment:HTCTCTGTTMYCTGAA---
----NANTTCATTGAATTA
 G T C A A G C T A G T C A G C T A G T C C G A T A T C G A G C T A C G T G T C A A G C T A G T C A C G T A C T G T C G A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G A T C C G T A T A G C C G A T C G A T T G A C G C T A G C A T C G A T A C T G C G T A G C T A G A C T C G A T C G T A

Stat4/MA0518.1/Jaspar

Match Rank:7
Score:0.49
Offset:3
Orientation:reverse strand
Alignment:HTCTCTGTTMYCTGAA-
---NNNTTTCCTGGAAA
 G T C A A G C T A G T C A G C T A G T C C G A T A T C G A G C T A C G T G T C A A G C T A G T C A C G T A C T G T C G A C G T A A C G T
A C G T A C G T A C G T A G T C A T G C T C G A A G C T A C G T A C G T A G T C G A T C G A C T C T A G A C T G G T C A C G T A T C G A

Tcf7/MA0769.1/Jaspar

Match Rank:8
Score:0.49
Offset:1
Orientation:reverse strand
Alignment:HTCTCTGTTMYCTGAA
-CCTTTGATCTTT---
 G T C A A G C T A G T C A G C T A G T C C G A T A T C G A G C T A C G T G T C A A G C T A G T C A C G T A C T G T C G A C G T A
A C G T A G T C A G T C C G A T A G C T G C A T A T C G T G C A G C A T T A G C G C A T G A C T G A C T A C G T A C G T A C G T

SA0002.1_at_AC_acceptor/Jaspar

Match Rank:9
Score:0.49
Offset:8
Orientation:reverse strand
Alignment:HTCTCTGTTMYCTGAA------------
--------NNCCTGNAAAAAAAAAAAAA
 G T C A A G C T A G T C A G C T A G T C C G A T A T C G A G C T A C G T G T C A A G C T A G T C A C G T A C T G T C G A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A C G T A A G T C A G T C A C G T C T A G C T G A C T G A C T G A C T G A C T G A T C G A T C G A T C G A T C G A C T G A C T G A C T G A T C G A C T G A

PH0167.1_Tcf1/Jaspar

Match Rank:10
Score:0.48
Offset:1
Orientation:forward strand
Alignment:HTCTCTGTTMYCTGAA--
-CCTTAGTTAACTAAAAT
 G T C A A G C T A G T C A G C T A G T C C G A T A T C G A G C T A C G T G T C A A G C T A G T C A C G T A C T G T C G A C G T A A C G T A C G T
A C G T G A T C A T G C A C G T A G C T T C A G A T C G G A C T G C A T C G T A C G T A A T G C G A C T C T G A T G C A C G T A C T G A A C G T