Information for 2-GASTYTCCMA (Motif 9)

A T C G G T C A T A G C A C G T A G T C A C G T G T A C G T A C G T C A C T G A
Reverse Opposite:
A G C T C A G T C A T G A C T G C G T A C T A G C G T A A T C G A C G T A T G C
p-value:1e-9
log p-value:-2.236e+01
Information Content per bp:1.699
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif2.55%
Number of Background Sequences with motif123.1
Percentage of Background Sequences with motif0.25%
Average Position of motif in Targets43.9 +/- 25.6bp
Average Position of motif in Background51.6 +/- 27.6bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RELA/MA0107.1/Jaspar

Match Rank:1
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--GASTYTCCMA
GGGAATTTCC--
 A C G T A C G T A T C G G T C A T A G C A C G T A G T C A C G T G T A C G T A C G T C A C T G A
A T C G A C T G A C T G C T G A T C G A C G A T A C G T A G C T A G T C A G T C A C G T A C G T

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:2
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--GASTYTCCMA
GGGAATTTCC--
 A C G T A C G T A T C G G T C A T A G C A C G T A G T C A C G T G T A C G T A C G T C A C T G A
A C T G C T A G A C T G C T G A T C G A C G A T A G C T C G A T G T A C G T A C A C G T A C G T

PB0134.1_Hnf4a_2/Jaspar

Match Rank:3
Score:0.63
Offset:-6
Orientation:reverse strand
Alignment:------GASTYTCCMA
NNATTGGACTTTNGNN
 A C G T A C G T A C G T A C G T A C G T A C G T A T C G G T C A T A G C A C G T A G T C A C G T G T A C G T A C G T C A C T G A
C G A T C A G T G C T A C A G T G A C T C T A G C A T G G T C A G T A C A G C T G A C T G C A T C A G T C T A G T G A C T G A C

NFATC1/MA0624.1/Jaspar

Match Rank:4
Score:0.62
Offset:1
Orientation:forward strand
Alignment:GASTYTCCMA-
-ATTTTCCATT
 A T C G G T C A T A G C A C G T A G T C A C G T G T A C G T A C G T C A C T G A A C G T
A C G T C G T A G C A T C G A T G A C T G A C T T G A C G A T C C T G A G A C T G C A T

NFATC3/MA0625.1/Jaspar

Match Rank:5
Score:0.62
Offset:1
Orientation:forward strand
Alignment:GASTYTCCMA-
-ATTTTCCATT
 A T C G G T C A T A G C A C G T A G T C A C G T G T A C G T A C G T C A C T G A A C G T
A C G T C G T A G A C T C G A T G C A T A G C T G T A C A T G C C T G A G A C T G C A T

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:6
Score:0.62
Offset:1
Orientation:forward strand
Alignment:GASTYTCCMA-
-ATTTTCCATT
 A T C G G T C A T A G C A C G T A G T C A C G T G T A C G T A C G T C A C T G A A C G T
A C G T C G T A A C G T A C G T A C G T A C G T A G T C A G T C C T G A A G C T A G C T

REL/MA0101.1/Jaspar

Match Rank:7
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--GASTYTCCMA
GGGGATTTCC--
 A C G T A C G T A T C G G T C A T A G C A C G T A G T C A C G T G T A C G T A C G T C A C T G A
A T C G A C T G C A T G C T A G G T C A C G A T C G A T C G A T A G T C G T A C A C G T A C G T

NFATC2/MA0152.1/Jaspar

Match Rank:8
Score:0.61
Offset:2
Orientation:forward strand
Alignment:GASTYTCCMA
--TTTTCCA-
 A T C G G T C A T A G C A C G T A G T C A C G T G T A C G T A C G T C A C T G A
A C G T A C G T C G A T A C G T G A C T A C G T G T A C A G T C G C T A A C G T

PB0136.1_IRC900814_2/Jaspar

Match Rank:9
Score:0.60
Offset:-6
Orientation:reverse strand
Alignment:------GASTYTCCMA
TTTTACGACTTTCCAT
 A C G T A C G T A C G T A C G T A C G T A C G T A T C G G T C A T A G C A C G T A G T C A C G T G T A C G T A C G T C A C T G A
C G A T A G C T G C A T A G C T T C G A G A T C C T A G C T G A G T A C C A G T A G C T G A C T G A T C T G A C T C G A G A C T

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:10
Score:0.59
Offset:2
Orientation:forward strand
Alignment:GASTYTCCMA--
--HTTTCCCASG
 A T C G G T C A T A G C A C G T A G T C A C G T G T A C G T A C G T C A C T G A A C G T A C G T
A C G T A C G T G A C T C A G T A G C T C G A T A G T C G A T C A G T C C G T A A T G C T C A G