Information for 4-AATAAAGGTYACCTAA (Motif 5)

G T C A C T G A G A C T T C G A C G T A C G T A A C T G A C T G A C G T G A T C C G T A A G T C A G T C C G A T T G C A G T C A
Reverse Opposite:
A C G T A C G T C G T A T A C G C T A G C G A T C T A G G T C A G T A C A G T C G A C T A C G T A C G T C G T A A G C T A C G T
p-value:1e-10
log p-value:-2.481e+01
Information Content per bp:1.692
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.82%
Number of Background Sequences with motif36.7
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets45.7 +/- 20.9bp
Average Position of motif in Background44.0 +/- 22.9bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0053.1_Rara_1/Jaspar

Match Rank:1
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-AATAAAGGTYACCTAA
TCTCAAAGGTCACCTG-
 A C G T G T C A C T G A G A C T T C G A C G T A C G T A A C T G A C T G A C G T G A T C C G T A A G T C A G T C C G A T T G C A G T C A
C A G T G T A C A G C T G T A C G C T A C T G A T C G A A C T G A C T G A C G T A G T C C T G A G A T C T A G C G A C T C A T G A C G T

PB0061.1_Sox11_1/Jaspar

Match Rank:2
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----AATAAAGGTYACCTAA
ATAAGAACAAAGGACTA----
 A C G T A C G T A C G T A C G T A C G T G T C A C T G A G A C T T C G A C G T A C G T A A C T G A C T G A C G T G A T C C G T A A G T C A G T C C G A T T G C A G T C A
G C T A A C G T C G T A C G T A C T A G T C G A C G T A A G T C C G T A G T C A C G T A C T A G T C A G T C G A A G T C G C A T G C T A A C G T A C G T A C G T A C G T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:3
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--AATAAAGGTYACCTAA
GGAACAAAGR--------
 A C G T A C G T G T C A C T G A G A C T T C G A C G T A C G T A A C T G A C T G A C G T G A T C C G T A A G T C A G T C C G A T T G C A G T C A
T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NR4A2/MA0160.1/Jaspar

Match Rank:4
Score:0.57
Offset:4
Orientation:forward strand
Alignment:AATAAAGGTYACCTAA
----AAGGTCAC----
 G T C A C T G A G A C T T C G A C G T A C G T A A C T G A C T G A C G T G A T C C G T A A G T C A G T C C G A T T G C A G T C A
A C G T A C G T A C G T A C G T C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C A C G T A C G T A C G T A C G T

PB0071.1_Sox4_1/Jaspar

Match Rank:5
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----AATAAAGGTYACCTAA
AGAAGAACAAAGGACTA----
 A C G T A C G T A C G T A C G T A C G T G T C A C T G A G A C T T C G A C G T A C G T A A C T G A C T G A C G T G A T C C G T A A G T C A G T C C G A T T G C A G T C A
G T C A A C T G C T G A C G T A C T A G T C G A C G T A A G T C C G T A C G T A C G T A C T A G T C A G T C G A A G T C G C A T G C T A A C G T A C G T A C G T A C G T

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:6
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-AATAAAGGTYACCTAA
ANGNAAAGGTCA-----
 A C G T G T C A C T G A G A C T T C G A C G T A C G T A A C T G A C T G A C G T G A T C C G T A A G T C A G T C C G A T T G C A G T C A
C T G A A C T G C A T G C A G T C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A A C G T A C G T A C G T A C G T A C G T

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:AATAAAGGTYACCTAA
--TCAAGGTCAN----
 G T C A C T G A G A C T T C G A C G T A C G T A A C T G A C T G A C G T G A T C C G T A A G T C A G T C C G A T T G C A G T C A
A C G T A C G T A G C T T A G C C T G A T C G A A T C G C A T G C A G T A T G C T C G A G T A C A C G T A C G T A C G T A C G T

Sox2/MA0143.3/Jaspar

Match Rank:8
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:AATAAAGGTYACCTAA
AACAAAGG--------
 G T C A C T G A G A C T T C G A C G T A C G T A A C T G A C T G A C G T G A T C C G T A A G T C A G T C C G A T T G C A G T C A
T C G A C G T A A G T C C G T A C G T A C G T A A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PH0046.1_Hoxa10/Jaspar

Match Rank:9
Score:0.55
Offset:-5
Orientation:forward strand
Alignment:-----AATAAAGGTYACCTAA
TAGGTAATAAAATTCA-----
 A C G T A C G T A C G T A C G T A C G T G T C A C T G A G A C T T C G A C G T A C G T A A C T G A C T G A C G T G A T C C G T A A G T C A G T C C G A T T G C A G T C A
C A G T G T C A A C T G T C A G G A C T G T C A C T G A G C A T C G T A C G T A G C T A G C T A G C A T C A G T G T A C C G T A A C G T A C G T A C G T A C G T A C G T

PB0049.1_Nr2f2_1/Jaspar

Match Rank:10
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-AATAAAGGTYACCTAA
TCTCAAAGGTCACGAG-
 A C G T G T C A C T G A G A C T T C G A C G T A C G T A A C T G A C T G A C G T G A T C C G T A A G T C A G T C C G A T T G C A G T C A
C A G T G T A C A C G T G T A C C G T A C T G A C T G A A C T G A C T G A C G T A G T C C T G A G T A C T A C G C G T A A C T G A C G T