Information for 1-AGTTAYATWRTTY (Motif 4)

C T G A C T A G A C G T A C G T C G T A A G T C C G T A A C G T C G A T C T G A A C G T A C G T A G C T
Reverse Opposite:
C T G A C G T A C G T A A G C T C G T A C G T A A C G T C T A G C G A T C G T A C G T A A G T C A G C T
p-value:1e-11
log p-value:-2.658e+01
Information Content per bp:1.872
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.27%
Number of Background Sequences with motif7.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets52.7 +/- 25.0bp
Average Position of motif in Background40.4 +/- 23.9bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIL3/MA0025.1/Jaspar

Match Rank:1
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-AGTTAYATWRTTY
ANGTTACATAA---
 A C G T C T G A C T A G A C G T A C G T C G T A A G T C C G T A A C G T C G A T C T G A A C G T A C G T A G C T
C G T A A G C T T C A G A G C T A C G T C G T A A G T C C T G A C G A T G T C A C G T A A C G T A C G T A C G T

HLF(bZIP)/HSC-HLF.Flag-ChIP-Seq(GSE69817)/Homer

Match Rank:2
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:AGTTAYATWRTTY
-VTTRCATAAY--
 C T G A C T A G A C G T A C G T C G T A A G T C C G T A A C G T C G A T C T G A A C G T A C G T A G C T
A C G T T C A G G A C T A C G T C T G A G A T C T C G A G A C T G T C A C T G A A G T C A C G T A C G T

DMRT1(DM)/Testis-DMRT1-ChIP-Seq(GSE64892)/Homer

Match Rank:3
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-AGTTAYATWRTTY-
TWGHWACAWTGTWDC
 A C G T C T G A C T A G A C G T A C G T C G T A A G T C C G T A A C G T C G A T C T G A A C G T A C G T A G C T A C G T
G C A T C G A T C T A G G C T A G C A T C G T A G A T C G C T A C G A T C G A T C T A G C G A T C G T A C G A T G A T C

DMRT6(DM)/Testis-DMRT6-ChIP-Seq(GSE60440)/Homer

Match Rank:4
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-AGTTAYATWRTTY-
YDGHTACAWTGTADC
 A C G T C T G A C T A G A C G T A C G T C G T A A G T C C G T A A C G T C G A T C T G A A C G T A C G T A G C T A C G T
G A C T C G A T C A T G G C T A G C A T C G T A A G T C G C T A G C A T C G A T T A C G G C A T C G T A C A G T G A T C

PB0070.1_Sox30_1/Jaspar

Match Rank:5
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:AGTTAYATWRTTY---
ANNTCCATTGTTCNNN
 C T G A C T A G A C G T A C G T C G T A A G T C C G T A A C G T C G A T C T G A A C G T A C G T A G C T A C G T A C G T A C G T
C T G A C T G A C A G T C G A T A G T C G T A C G C T A A G C T C A G T T C A G C G A T A G C T T A G C G C T A C G A T G A C T

PB0073.1_Sox7_1/Jaspar

Match Rank:6
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---AGTTAYATWRTTY------
TNNANNTCTATTGTTNTNNANN
 A C G T A C G T A C G T C T G A C T A G A C G T A C G T C G T A A G T C C G T A A C G T C G A T C T G A A C G T A C G T A G C T A C G T A C G T A C G T A C G T A C G T A C G T
C G A T T C A G C G T A C G T A C T G A C G A T C G A T A G T C G A C T C G T A A G C T C G A T T C A G C G A T G A C T G A T C G C A T C G A T G A C T T G C A C G A T C A G T

DBP/MA0639.1/Jaspar

Match Rank:7
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:AGTTAYATWRTTY
NGTTACGTAATN-
 C T G A C T A G A C G T A C G T C G T A A G T C C G T A A C G T C G A T C T G A A C G T A C G T A G C T
A G C T T C A G G A C T A C G T T C G A A G T C T C A G G A C T T G C A C G T A A G C T T G C A A C G T

PB0066.1_Sox17_1/Jaspar

Match Rank:8
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:AGTTAYATWRTTY--
NNATNAATTGTTTNN
 C T G A C T A G A C G T A C G T C G T A A G T C C G T A A C G T C G A T C T G A A C G T A C G T A G C T A C G T A C G T
G C A T C T A G C G A T C G A T A G C T G C T A C G T A G C A T C G A T T C A G C G A T A C G T G A C T G C T A A C G T

PB0074.1_Sox8_1/Jaspar

Match Rank:9
Score:0.61
Offset:0
Orientation:forward strand
Alignment:AGTTAYATWRTTY----
GTATCTATTGTTCTTTA
 C T G A C T A G A C G T A C G T C G T A A G T C C G T A A C G T C G A T C T G A A C G T A C G T A G C T A C G T A C G T A C G T A C G T
C A G T C A G T C G T A C G A T A G C T G C A T C G T A G A C T C G A T T C A G C G A T G A C T G T A C G C A T C A G T C G A T C G T A

HLF/MA0043.2/Jaspar

Match Rank:10
Score:0.60
Offset:0
Orientation:forward strand
Alignment:AGTTAYATWRTTY
CATTACGTAACC-
 C T G A C T A G A C G T A C G T C G T A A G T C C G T A A C G T C G A T C T G A A C G T A C G T A G C T
G A T C T C G A G C A T A C G T C T G A A G T C T C A G G A C T G T C A C G T A A G T C G T A C A C G T