Information for 13-TRTRTGTRTRTGYRYA (Motif 24)

G C A T C T G A A G C T C T G A A G C T C T A G A G C T C T G A A G C T C T G A A G C T C T A G G A T C C T G A A G T C C T G A
Reverse Opposite:
G A C T C T A G A G C T C T A G A G T C C T G A A G C T C T G A A G C T C T G A A G T C C T G A A G C T C T G A A G C T C G T A
p-value:1e-2
log p-value:-6.009e+00
Information Content per bp:1.676
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif1.09%
Number of Background Sequences with motif121.4
Percentage of Background Sequences with motif0.24%
Average Position of motif in Targets66.2 +/- 18.0bp
Average Position of motif in Background56.6 +/- 30.6bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

OCT:OCT(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer

Match Rank:1
Score:0.75
Offset:1
Orientation:reverse strand
Alignment:TRTRTGTRTRTGYRYA
-AYATGYATATGCATR
 G C A T C T G A A G C T C T G A A G C T C T A G A G C T C T G A A G C T C T G A A G C T C T A G G A T C C T G A A G T C C T G A
A C G T C T G A G A C T C T G A G A C T C T A G G A T C C T G A G A C T C T G A G A C T C T A G G A T C C T G A G C A T C T A G

PB0104.1_Zscan4_1/Jaspar

Match Rank:2
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:TRTRTGTRTRTGYRYA----
---NTNTATGTGCACATNNN
 G C A T C T G A A G C T C T G A A G C T C T A G A G C T C T G A A G C T C T G A A G C T C T A G G A T C C T G A A G T C C T G A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C A G T G C A T C G A T C G A T C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A G A C T A C T G C A G T G T C A

PB0026.1_Gm397_1/Jaspar

Match Rank:3
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:TRTRTGTRTRTGYRYA----
---NNGTATGTGCACATNNN
 G C A T C T G A A G C T C T G A A G C T C T A G A G C T C T G A A G C T C T G A A G C T C T A G G A T C C T G A A G T C C T G A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T G A G T A C C A T G C A G T T C G A C G A T T A C G A G C T C T A G A G T C C T G A A T G C G C T A G C A T G T A C C G A T C A T G

PB0170.1_Sox17_2/Jaspar

Match Rank:4
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--TRTRTGTRTRTGYRYA
NTTNTATGAATGTGNNC-
 A C G T A C G T G C A T C T G A A G C T C T G A A G C T C T A G A G C T C T G A A G C T C T G A A G C T C T A G G A T C C T G A A G T C C T G A
G C T A G C A T A G C T C T A G A G C T T C G A A G C T A C T G G C T A C T G A C G A T T C A G C A G T C A T G T C A G C G A T A T G C A C G T

PB0198.1_Zfp128_2/Jaspar

Match Rank:5
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--TRTRTGTRTRTGYRYA
NNTATANATATACN----
 A C G T A C G T G C A T C T G A A G C T C T G A A G C T C T A G A G C T C T G A A G C T C T G A A G C T C T A G G A T C C T G A A G T C C T G A
A T C G A C T G G C A T C T G A G C A T C T G A G C A T C T G A G A C T C G T A G A C T C G T A G T A C G T C A A C G T A C G T A C G T A C G T

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:6
Score:0.54
Offset:3
Orientation:forward strand
Alignment:TRTRTGTRTRTGYRYA
---ATGMATATDC---
 G C A T C T G A A G C T C T G A A G C T C T A G A G C T C T G A A G C T C T G A A G C T C T A G G A T C C T G A A G T C C T G A
A C G T A C G T A C G T G C T A A C G T C T A G G T A C G C T A G A C T C T G A G C A T C A T G G A T C A C G T A C G T A C G T

OCT:OCT(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:7
Score:0.53
Offset:3
Orientation:forward strand
Alignment:TRTRTGTRTRTGYRYA--
---ATGAATATTCATGAG
 G C A T C T G A A G C T C T G A A G C T C T A G A G C T C T G A A G C T C T G A A G C T C T A G G A T C C T G A A G T C C T G A A C G T A C G T
A C G T A C G T A C G T G C T A A C G T C T A G G T C A C G T A A C G T C G T A C G A T C A G T A G T C C G T A A C G T C T A G C T G A A T C G

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:8
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:TRTRTGTRTRTGYRYA
-ATTTGCATAT-----
 G C A T C T G A A G C T C T G A A G C T C T A G A G C T C T G A A G C T C T G A A G C T C T A G G A T C C T G A A G T C C T G A
A C G T G C T A C G A T G A C T A C G T C T A G G A T C G T C A C G A T C G T A C A G T A C G T A C G T A C G T A C G T A C G T

PH0087.1_Irx6/Jaspar

Match Rank:9
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:TRTRTGTRTRTGYRYA--
-ANTTNTACATGTANTTN
 G C A T C T G A A G C T C T G A A G C T C T A G A G C T C T G A A G C T C T G A A G C T C T A G G A T C C T G A A G T C C T G A A C G T A C G T
A C G T G C T A C G A T C G A T G C A T A C G T C G A T C G T A A G T C C G T A G C A T C T A G C G A T G C T A G A C T C G A T C G A T C G A T

POU2F2/MA0507.1/Jaspar

Match Rank:10
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:TRTRTGTRTRTGYRYA
-ATATGCAAATNNN--
 G C A T C T G A A G C T C T G A A G C T C T A G A G C T C T G A A G C T C T G A A G C T C T A G G A T C C T G A A G T C C T G A
A C G T C G T A G A C T C T G A A C G T C T A G G A T C C G T A C G T A C G T A C G A T C A T G G T C A C T G A A C G T A C G T